Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1482 and Dshi_R0028 are separated by 51 nucleotides Dshi_R0028 and Dshi_1483 are separated by 43 nucleotides Dshi_1483 and Dshi_1484 are separated by 163 nucleotides Dshi_1484 and Dshi_1485 are separated by 187 nucleotides
Dshi_1482: Dshi_1482 - TRAP dicarboxylate transporter, DctM subunit (RefSeq), at 1,536,841 to 1,538,193
_1482
Dshi_R0028: Dshi_R0028 - tRNA-Leu (RefSeq), at 1,538,245 to 1,538,331
_R0028
Dshi_1483: Dshi_1483 - hypothetical protein (RefSeq), at 1,538,375 to 1,538,743
_1483
Dshi_1484: Dshi_1484 - hypothetical protein (RefSeq), at 1,538,907 to 1,539,512
_1484
Dshi_1485: Dshi_1485 - FAD dependent oxidoreductase (RefSeq), at 1,539,700 to 1,542,114
_1485
Position (kb)
1538
1539
1540 Strain fitness (log2 ratio)
-2
-1
0
1 at 1537.966 kb on - strand, within Dshi_1482 at 1538.091 kb on - strand at 1538.384 kb on + strand at 1538.669 kb on - strand, within Dshi_1483 at 1539.008 kb on - strand, within Dshi_1484 at 1539.146 kb on + strand, within Dshi_1484 at 1539.254 kb on + strand, within Dshi_1484 at 1539.426 kb on + strand, within Dshi_1484 at 1539.487 kb on + strand at 1539.491 kb on + strand at 1539.612 kb on - strand at 1539.758 kb on - strand at 1539.802 kb on - strand at 1539.826 kb on + strand at 1539.924 kb on - strand at 1540.084 kb on - strand, within Dshi_1485 at 1540.184 kb on - strand, within Dshi_1485 at 1540.255 kb on + strand, within Dshi_1485
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,537,966 - Dshi_1482 0.83 +0.5 1,538,091 - -1.4 1,538,384 + -1.8 1,538,669 - Dshi_1483 0.80 -1.7 1,539,008 - Dshi_1484 0.17 +1.0 1,539,146 + Dshi_1484 0.39 -1.5 1,539,254 + Dshi_1484 0.57 +0.5 1,539,426 + Dshi_1484 0.86 -1.0 1,539,487 + -0.5 1,539,491 + +0.5 1,539,612 - +1.5 1,539,758 - -1.8 1,539,802 - +0.5 1,539,826 + -0.5 1,539,924 - +0.1 1,540,084 - Dshi_1485 0.16 -0.3 1,540,184 - Dshi_1485 0.20 +0.5 1,540,255 + Dshi_1485 0.23 +0.2
Or see this region's nucleotide sequence