Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1480
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,534,735 | - | -1.8 | |||
1,535,053 | - | -2.2 | |||
1,535,073 | + | -0.0 | |||
1,535,084 | + | +1.0 | |||
1,535,143 | + | Dshi_1480 | 0.10 | -1.5 | |
1,535,300 | + | Dshi_1480 | 0.25 | +0.9 | |
1,535,366 | + | Dshi_1480 | 0.32 | -1.3 | |
1,535,451 | + | Dshi_1480 | 0.40 | +0.5 | |
1,535,455 | - | Dshi_1480 | 0.40 | -1.6 | |
1,535,484 | - | Dshi_1480 | 0.43 | +1.3 | |
1,535,484 | - | Dshi_1480 | 0.43 | -0.2 | |
1,535,533 | + | Dshi_1480 | 0.48 | -0.9 | |
1,535,551 | - | Dshi_1480 | 0.50 | -1.5 | |
1,535,589 | - | Dshi_1480 | 0.53 | -1.5 | |
1,535,747 | - | Dshi_1480 | 0.68 | +0.5 | |
1,535,851 | - | Dshi_1480 | 0.78 | -0.8 | |
1,535,890 | - | Dshi_1480 | 0.82 | -0.3 | |
1,535,979 | + | -0.9 | |||
1,535,987 | - | +1.5 | |||
1,536,033 | - | -0.9 | |||
1,536,084 | + | +0.7 | |||
1,536,161 | + | -1.8 | |||
1,536,218 | - | +1.5 | |||
1,536,282 | - | -0.3 | |||
1,536,320 | + | -0.6 | |||
1,536,754 | + | Dshi_1481 | 0.84 | +4.2 | |
1,536,794 | + | +0.2 | |||
1,536,848 | + | -0.6 |
Or see this region's nucleotide sequence