Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1444 and Dshi_1445 are separated by 12 nucleotides Dshi_1445 and Dshi_1446 are separated by 3 nucleotides Dshi_1446 and Dshi_1447 are separated by 254 nucleotides
Dshi_1444: Dshi_1444 - TRAP transporter, 4TM/12TM fusion protein (RefSeq), at 1,500,927 to 1,503,581
_1444
Dshi_1445: Dshi_1445 - UspA domain protein (RefSeq), at 1,503,594 to 1,504,028
_1445
Dshi_1446: Dshi_1446 - aminotransferase class-III (RefSeq), at 1,504,032 to 1,505,366
_1446
Dshi_1447: Dshi_1447 - transposase (RefSeq), at 1,505,621 to 1,505,779
_1447
Position (kb)
1504
1505
1506 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1503.033 kb on + strand, within Dshi_1444 at 1503.042 kb on - strand, within Dshi_1444 at 1503.055 kb on - strand, within Dshi_1444 at 1503.071 kb on - strand, within Dshi_1444 at 1503.577 kb on + strand at 1503.596 kb on + strand at 1503.664 kb on + strand, within Dshi_1445 at 1503.756 kb on - strand, within Dshi_1445 at 1503.786 kb on - strand, within Dshi_1445 at 1503.847 kb on + strand, within Dshi_1445 at 1503.942 kb on - strand, within Dshi_1445 at 1504.022 kb on + strand at 1504.254 kb on + strand, within Dshi_1446 at 1504.280 kb on - strand, within Dshi_1446 at 1504.316 kb on + strand, within Dshi_1446 at 1504.316 kb on + strand, within Dshi_1446 at 1504.613 kb on + strand, within Dshi_1446 at 1504.757 kb on + strand, within Dshi_1446 at 1504.785 kb on + strand, within Dshi_1446 at 1504.785 kb on + strand, within Dshi_1446 at 1504.859 kb on - strand, within Dshi_1446 at 1505.016 kb on - strand, within Dshi_1446 at 1505.059 kb on - strand, within Dshi_1446 at 1505.257 kb on + strand at 1505.270 kb on + strand at 1505.321 kb on - strand at 1505.360 kb on + strand at 1505.360 kb on + strand at 1505.360 kb on + strand at 1505.360 kb on + strand at 1505.368 kb on - strand at 1505.368 kb on - strand at 1505.368 kb on - strand at 1505.383 kb on + strand at 1505.383 kb on + strand at 1505.422 kb on + strand at 1505.552 kb on - strand at 1505.604 kb on + strand at 1505.608 kb on - strand at 1505.676 kb on - strand, within Dshi_1447 at 1505.811 kb on - strand at 1505.846 kb on + strand at 1505.931 kb on - strand at 1506.216 kb on + strand at 1506.216 kb on + strand at 1506.217 kb on + strand at 1506.225 kb on + strand at 1506.337 kb on + strand at 1506.342 kb on + strand at 1506.350 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,503,033 + Dshi_1444 0.79 -0.2 1,503,042 - Dshi_1444 0.80 -0.1 1,503,055 - Dshi_1444 0.80 +1.8 1,503,071 - Dshi_1444 0.81 +1.7 1,503,577 + -0.2 1,503,596 + -1.3 1,503,664 + Dshi_1445 0.16 -1.4 1,503,756 - Dshi_1445 0.37 -1.4 1,503,786 - Dshi_1445 0.44 -0.4 1,503,847 + Dshi_1445 0.58 -0.7 1,503,942 - Dshi_1445 0.80 -0.7 1,504,022 + -1.9 1,504,254 + Dshi_1446 0.17 +0.6 1,504,280 - Dshi_1446 0.19 +0.8 1,504,316 + Dshi_1446 0.21 -0.4 1,504,316 + Dshi_1446 0.21 +0.7 1,504,613 + Dshi_1446 0.44 +1.2 1,504,757 + Dshi_1446 0.54 +0.6 1,504,785 + Dshi_1446 0.56 -1.0 1,504,785 + Dshi_1446 0.56 +2.9 1,504,859 - Dshi_1446 0.62 +0.3 1,505,016 - Dshi_1446 0.74 +0.3 1,505,059 - Dshi_1446 0.77 +1.4 1,505,257 + +0.6 1,505,270 + -2.1 1,505,321 - -3.2 1,505,360 + -1.2 1,505,360 + +2.8 1,505,360 + -1.2 1,505,360 + -1.0 1,505,368 - +0.4 1,505,368 - +2.2 1,505,368 - -0.7 1,505,383 + +0.0 1,505,383 + -1.0 1,505,422 + -1.6 1,505,552 - +0.6 1,505,604 + -0.9 1,505,608 - -1.7 1,505,676 - Dshi_1447 0.35 +0.6 1,505,811 - +0.6 1,505,846 + -1.0 1,505,931 - -2.7 1,506,216 + -2.6 1,506,216 + -0.6 1,506,217 + +0.0 1,506,225 + +0.6 1,506,337 + -1.7 1,506,342 + -1.2 1,506,350 - -2.0
Or see this region's nucleotide sequence