Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1379
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,431,385 | + | Dshi_1377 | 0.75 | +1.0 | |
1,431,385 | + | Dshi_1377 | 0.75 | +1.8 | |
1,431,393 | - | Dshi_1377 | 0.76 | +1.2 | |
1,431,538 | + | -2.1 | |||
1,431,551 | - | +2.4 | |||
1,431,625 | + | +1.1 | |||
1,431,757 | + | Dshi_1378 | 0.23 | -2.6 | |
1,431,846 | - | Dshi_1378 | 0.37 | +2.7 | |
1,431,978 | + | Dshi_1378 | 0.58 | -0.1 | |
1,432,152 | + | Dshi_1378 | 0.86 | -1.6 | |
1,432,177 | - | Dshi_1378 | 0.89 | -0.9 | |
1,432,177 | - | Dshi_1378 | 0.89 | -2.3 | |
1,432,442 | + | Dshi_1379 | 0.34 | -0.4 | |
1,432,618 | + | Dshi_1379 | 0.64 | -1.5 | |
1,432,765 | - | +2.2 | |||
1,432,795 | - | +0.2 | |||
1,432,952 | + | -1.3 | |||
1,433,107 | + | Dshi_1380 | 0.11 | -3.2 | |
1,433,207 | + | Dshi_1380 | 0.18 | -2.6 | |
1,433,215 | - | Dshi_1380 | 0.19 | -0.3 | |
1,433,266 | + | Dshi_1380 | 0.23 | +0.8 | |
1,433,382 | - | Dshi_1380 | 0.31 | +2.7 | |
1,433,407 | + | Dshi_1380 | 0.33 | -2.2 |
Or see this region's nucleotide sequence