Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1358
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,410,088 | + | Dshi_1357 | 0.15 | +3.0 | |
1,410,122 | + | Dshi_1357 | 0.18 | -0.5 | |
1,410,152 | + | Dshi_1357 | 0.21 | +0.1 | |
1,410,162 | + | +1.7 | |||
1,410,179 | - | Dshi_1357 | 0.24 | -0.1 | |
1,410,359 | + | Dshi_1357 | 0.41 | +0.4 | |
1,410,389 | + | +0.7 | |||
1,410,477 | - | Dshi_1357 | 0.52 | -0.5 | |
1,410,487 | + | Dshi_1357 | 0.53 | -0.5 | |
1,410,581 | + | Dshi_1357 | 0.62 | +0.7 | |
1,410,638 | + | Dshi_1357 | 0.67 | +0.3 | |
1,410,801 | + | Dshi_1357 | 0.83 | +0.5 | |
1,410,880 | - | +0.2 | |||
1,411,010 | + | -1.3 | |||
1,411,158 | + | Dshi_1358 | 0.22 | +1.1 | |
1,411,206 | + | Dshi_1358 | 0.29 | +1.1 | |
1,411,357 | - | Dshi_1358 | 0.48 | +2.7 | |
1,411,366 | - | Dshi_1358 | 0.49 | +0.0 | |
1,411,498 | - | Dshi_1358 | 0.66 | -1.6 | |
1,411,498 | - | Dshi_1358 | 0.66 | -0.9 | |
1,411,630 | - | Dshi_1358 | 0.83 | +2.7 | |
1,411,642 | + | Dshi_1358 | 0.85 | -2.3 | |
1,411,765 | - | -3.6 | |||
1,411,857 | + | +0.2 | |||
1,412,126 | + | Dshi_1359 | 0.57 | +0.5 | |
1,412,184 | - | Dshi_1359 | 0.73 | +1.7 | |
1,412,443 | - | Dshi_1360 | 0.16 | -2.9 | |
1,412,496 | - | Dshi_1360 | 0.21 | +0.9 | |
1,412,550 | + | Dshi_1360 | 0.26 | -2.1 | |
1,412,709 | - | Dshi_1360 | 0.42 | -0.3 | |
1,412,709 | - | Dshi_1360 | 0.42 | +1.7 |
Or see this region's nucleotide sequence