Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1259 and Dshi_1260 are separated by 10 nucleotides Dshi_1260 and Dshi_1261 are separated by 89 nucleotides Dshi_1261 and Dshi_1262 are separated by 6 nucleotides
Dshi_1259: Dshi_1259 - heavy metal translocating P-type ATPase (RefSeq), at 1,305,092 to 1,307,596
_1259
Dshi_1260: Dshi_1260 - transcriptional regulator, MerR family (RefSeq), at 1,307,607 to 1,308,002
_1260
Dshi_1261: Dshi_1261 - sodium/glutamate symporter (RefSeq), at 1,308,092 to 1,309,300
_1261
Dshi_1262: Dshi_1262 - acriflavin resistance protein (RefSeq), at 1,309,307 to 1,312,360
_1262
Position (kb)
1308
1309
1310 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1307.131 kb on + strand, within Dshi_1259 at 1307.223 kb on + strand, within Dshi_1259 at 1307.252 kb on + strand, within Dshi_1259 at 1307.322 kb on - strand, within Dshi_1259 at 1307.353 kb on + strand at 1307.409 kb on + strand at 1307.653 kb on - strand, within Dshi_1260 at 1307.780 kb on - strand, within Dshi_1260 at 1307.781 kb on + strand, within Dshi_1260 at 1308.051 kb on - strand at 1308.070 kb on - strand at 1308.128 kb on + strand at 1308.133 kb on + strand at 1308.209 kb on - strand at 1308.270 kb on - strand, within Dshi_1261 at 1308.303 kb on + strand, within Dshi_1261 at 1308.418 kb on + strand, within Dshi_1261 at 1308.666 kb on + strand, within Dshi_1261 at 1308.676 kb on - strand, within Dshi_1261 at 1308.857 kb on + strand, within Dshi_1261 at 1308.902 kb on + strand, within Dshi_1261 at 1309.018 kb on - strand, within Dshi_1261 at 1309.061 kb on - strand, within Dshi_1261 at 1309.126 kb on - strand, within Dshi_1261 at 1309.293 kb on + strand at 1309.311 kb on - strand at 1309.648 kb on - strand, within Dshi_1262 at 1309.759 kb on + strand, within Dshi_1262 at 1309.778 kb on - strand, within Dshi_1262 at 1309.784 kb on + strand, within Dshi_1262 at 1310.053 kb on - strand, within Dshi_1262 at 1310.146 kb on - strand, within Dshi_1262 at 1310.168 kb on + strand, within Dshi_1262 at 1310.176 kb on - strand, within Dshi_1262 at 1310.176 kb on - strand, within Dshi_1262 at 1310.179 kb on - strand, within Dshi_1262
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,307,131 + Dshi_1259 0.81 -1.1 1,307,223 + Dshi_1259 0.85 +4.2 1,307,252 + Dshi_1259 0.86 -1.2 1,307,322 - Dshi_1259 0.89 -0.9 1,307,353 + +0.2 1,307,409 + +0.6 1,307,653 - Dshi_1260 0.12 +2.1 1,307,780 - Dshi_1260 0.44 +0.8 1,307,781 + Dshi_1260 0.44 -1.8 1,308,051 - +0.4 1,308,070 - -0.7 1,308,128 + +0.4 1,308,133 + -2.6 1,308,209 - -0.4 1,308,270 - Dshi_1261 0.15 -1.8 1,308,303 + Dshi_1261 0.17 +0.1 1,308,418 + Dshi_1261 0.27 -0.0 1,308,666 + Dshi_1261 0.47 -0.4 1,308,676 - Dshi_1261 0.48 +0.3 1,308,857 + Dshi_1261 0.63 +0.5 1,308,902 + Dshi_1261 0.67 -2.2 1,309,018 - Dshi_1261 0.77 -3.2 1,309,061 - Dshi_1261 0.80 -1.1 1,309,126 - Dshi_1261 0.86 -0.2 1,309,293 + -0.1 1,309,311 - -0.0 1,309,648 - Dshi_1262 0.11 +0.6 1,309,759 + Dshi_1262 0.15 -1.4 1,309,778 - Dshi_1262 0.15 +1.9 1,309,784 + Dshi_1262 0.16 -1.2 1,310,053 - Dshi_1262 0.24 -1.0 1,310,146 - Dshi_1262 0.27 -0.4 1,310,168 + Dshi_1262 0.28 -1.2 1,310,176 - Dshi_1262 0.28 -1.0 1,310,176 - Dshi_1262 0.28 +2.0 1,310,179 - Dshi_1262 0.29 +0.8
Or see this region's nucleotide sequence