Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1220 and Dshi_1221 are separated by 167 nucleotides Dshi_1221 and Dshi_1222 are separated by 330 nucleotides
Dshi_1220: Dshi_1220 - hypothetical protein (RefSeq), at 1,260,637 to 1,261,623
_1220
Dshi_1221: Dshi_1221 - transcriptional regulator, XRE family (RefSeq), at 1,261,791 to 1,263,197
_1221
Dshi_1222: Dshi_1222 - short-chain dehydrogenase/reductase SDR (RefSeq), at 1,263,528 to 1,264,271
_1222
Position (kb)
1261
1262
1263
1264 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1261.062 kb on + strand, within Dshi_1220 at 1261.194 kb on - strand, within Dshi_1220 at 1261.214 kb on + strand, within Dshi_1220 at 1261.235 kb on - strand, within Dshi_1220 at 1261.297 kb on + strand, within Dshi_1220 at 1261.307 kb on + strand, within Dshi_1220 at 1261.326 kb on - strand, within Dshi_1220 at 1261.522 kb on + strand, within Dshi_1220 at 1261.655 kb on + strand at 1261.682 kb on + strand at 1261.689 kb on + strand at 1261.704 kb on + strand at 1261.788 kb on + strand at 1261.863 kb on + strand at 1261.871 kb on - strand at 1261.944 kb on + strand, within Dshi_1221 at 1261.944 kb on + strand, within Dshi_1221 at 1261.965 kb on - strand, within Dshi_1221 at 1262.090 kb on - strand, within Dshi_1221 at 1262.154 kb on - strand, within Dshi_1221 at 1262.169 kb on + strand, within Dshi_1221 at 1262.418 kb on - strand, within Dshi_1221 at 1262.569 kb on + strand, within Dshi_1221 at 1262.572 kb on + strand, within Dshi_1221 at 1262.627 kb on - strand, within Dshi_1221 at 1262.699 kb on + strand, within Dshi_1221 at 1262.795 kb on + strand, within Dshi_1221 at 1262.833 kb on + strand, within Dshi_1221 at 1262.855 kb on + strand, within Dshi_1221 at 1263.048 kb on - strand, within Dshi_1221 at 1263.055 kb on + strand, within Dshi_1221 at 1263.112 kb on + strand at 1263.113 kb on - strand at 1263.113 kb on - strand at 1263.113 kb on - strand at 1263.113 kb on - strand at 1263.262 kb on + strand at 1264.029 kb on + strand, within Dshi_1222
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,261,062 + Dshi_1220 0.43 +3.5 1,261,194 - Dshi_1220 0.56 -1.9 1,261,214 + Dshi_1220 0.58 -0.8 1,261,235 - Dshi_1220 0.61 -0.7 1,261,297 + Dshi_1220 0.67 +0.7 1,261,307 + Dshi_1220 0.68 -0.0 1,261,326 - Dshi_1220 0.70 -1.1 1,261,522 + Dshi_1220 0.90 +1.4 1,261,655 + +0.7 1,261,682 + +1.7 1,261,689 + -0.3 1,261,704 + +0.7 1,261,788 + +2.1 1,261,863 + +1.9 1,261,871 - +1.8 1,261,944 + Dshi_1221 0.11 -0.5 1,261,944 + Dshi_1221 0.11 -0.0 1,261,965 - Dshi_1221 0.12 -1.2 1,262,090 - Dshi_1221 0.21 +0.1 1,262,154 - Dshi_1221 0.26 -3.8 1,262,169 + Dshi_1221 0.27 -0.8 1,262,418 - Dshi_1221 0.45 -1.4 1,262,569 + Dshi_1221 0.55 +1.4 1,262,572 + Dshi_1221 0.56 +1.7 1,262,627 - Dshi_1221 0.59 -0.5 1,262,699 + Dshi_1221 0.65 +0.7 1,262,795 + Dshi_1221 0.71 -0.8 1,262,833 + Dshi_1221 0.74 +3.0 1,262,855 + Dshi_1221 0.76 -1.7 1,263,048 - Dshi_1221 0.89 -0.3 1,263,055 + Dshi_1221 0.90 +1.8 1,263,112 + -0.8 1,263,113 - +0.8 1,263,113 - -2.3 1,263,113 - +3.2 1,263,113 - -0.8 1,263,262 + +2.2 1,264,029 + Dshi_1222 0.67 -0.9
Or see this region's nucleotide sequence