Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1001 and Dshi_1002 are separated by 132 nucleotides Dshi_1002 and Dshi_1003 are separated by 14 nucleotides
Dshi_1001: Dshi_1001 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq), at 1,034,458 to 1,035,408
_1001
Dshi_1002: Dshi_1002 - Cystathionine gamma-synthase (RefSeq), at 1,035,541 to 1,036,683
_1002
Dshi_1003: Dshi_1003 - aminoglycoside phosphotransferase (RefSeq), at 1,036,698 to 1,037,711
_1003
Position (kb)
1035
1036
1037 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1034.593 kb on - strand, within Dshi_1001 at 1034.635 kb on + strand, within Dshi_1001 at 1034.672 kb on + strand, within Dshi_1001 at 1034.730 kb on + strand, within Dshi_1001 at 1034.737 kb on - strand, within Dshi_1001 at 1034.803 kb on + strand, within Dshi_1001 at 1034.866 kb on - strand, within Dshi_1001 at 1034.866 kb on - strand, within Dshi_1001 at 1034.926 kb on - strand, within Dshi_1001 at 1035.042 kb on + strand, within Dshi_1001 at 1035.075 kb on + strand, within Dshi_1001 at 1035.175 kb on + strand, within Dshi_1001 at 1035.188 kb on - strand, within Dshi_1001 at 1035.379 kb on - strand at 1035.612 kb on + strand at 1035.779 kb on + strand, within Dshi_1002 at 1035.779 kb on + strand, within Dshi_1002 at 1035.783 kb on - strand, within Dshi_1002 at 1035.901 kb on - strand, within Dshi_1002 at 1035.958 kb on - strand, within Dshi_1002 at 1036.118 kb on - strand, within Dshi_1002 at 1036.120 kb on - strand, within Dshi_1002 at 1036.131 kb on - strand, within Dshi_1002 at 1036.489 kb on + strand, within Dshi_1002 at 1036.541 kb on + strand, within Dshi_1002 at 1036.871 kb on - strand, within Dshi_1003 at 1036.886 kb on - strand, within Dshi_1003 at 1036.929 kb on + strand, within Dshi_1003 at 1036.944 kb on + strand, within Dshi_1003 at 1037.025 kb on + strand, within Dshi_1003 at 1037.089 kb on + strand, within Dshi_1003 at 1037.208 kb on + strand, within Dshi_1003 at 1037.363 kb on - strand, within Dshi_1003 at 1037.481 kb on + strand, within Dshi_1003 at 1037.530 kb on + strand, within Dshi_1003 at 1037.530 kb on + strand, within Dshi_1003 at 1037.653 kb on + strand at 1037.679 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,034,593 - Dshi_1001 0.14 +0.7 1,034,635 + Dshi_1001 0.19 +0.4 1,034,672 + Dshi_1001 0.23 -1.0 1,034,730 + Dshi_1001 0.29 +0.3 1,034,737 - Dshi_1001 0.29 +0.7 1,034,803 + Dshi_1001 0.36 -0.9 1,034,866 - Dshi_1001 0.43 +2.3 1,034,866 - Dshi_1001 0.43 -0.7 1,034,926 - Dshi_1001 0.49 -0.9 1,035,042 + Dshi_1001 0.61 -0.1 1,035,075 + Dshi_1001 0.65 -0.6 1,035,175 + Dshi_1001 0.75 +0.7 1,035,188 - Dshi_1001 0.77 -1.6 1,035,379 - -0.3 1,035,612 + -0.9 1,035,779 + Dshi_1002 0.21 -1.6 1,035,779 + Dshi_1002 0.21 +0.7 1,035,783 - Dshi_1002 0.21 +2.3 1,035,901 - Dshi_1002 0.31 -0.9 1,035,958 - Dshi_1002 0.36 +1.3 1,036,118 - Dshi_1002 0.50 -1.7 1,036,120 - Dshi_1002 0.51 +2.3 1,036,131 - Dshi_1002 0.52 +2.3 1,036,489 + Dshi_1002 0.83 -0.3 1,036,541 + Dshi_1002 0.87 +0.7 1,036,871 - Dshi_1003 0.17 -0.5 1,036,886 - Dshi_1003 0.19 -1.6 1,036,929 + Dshi_1003 0.23 -2.4 1,036,944 + Dshi_1003 0.24 +0.7 1,037,025 + Dshi_1003 0.32 +0.7 1,037,089 + Dshi_1003 0.39 +2.3 1,037,208 + Dshi_1003 0.50 -0.3 1,037,363 - Dshi_1003 0.66 +0.7 1,037,481 + Dshi_1003 0.77 -0.9 1,037,530 + Dshi_1003 0.82 +3.0 1,037,530 + Dshi_1003 0.82 +1.0 1,037,653 + -2.3 1,037,679 + -1.9
Or see this region's nucleotide sequence