Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_R0024 and Dshi_0993 are separated by 290 nucleotides
Dshi_R0024: Dshi_R0024 - tRNA-Ser (RefSeq), at 1,021,732 to 1,021,821
_R0024
Dshi_0993: Dshi_0993 - TRAP transporter solute receptor, TAXI family (RefSeq), at 1,022,112 to 1,023,083
_0993
Position (kb)
1021
1022 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1020.732 kb on - strand at 1020.732 kb on - strand at 1020.736 kb on - strand at 1020.738 kb on + strand at 1020.738 kb on + strand at 1020.738 kb on + strand at 1020.738 kb on + strand at 1020.738 kb on + strand at 1020.738 kb on - strand at 1020.746 kb on - strand at 1020.746 kb on - strand at 1020.751 kb on + strand at 1020.751 kb on + strand at 1020.751 kb on + strand at 1020.759 kb on - strand at 1020.762 kb on + strand at 1020.767 kb on + strand at 1020.772 kb on + strand at 1020.779 kb on + strand at 1020.779 kb on + strand at 1020.779 kb on + strand at 1020.780 kb on - strand at 1020.785 kb on + strand at 1020.786 kb on + strand at 1020.786 kb on + strand at 1020.786 kb on + strand at 1020.786 kb on + strand at 1020.787 kb on - strand at 1020.787 kb on - strand at 1020.791 kb on + strand at 1020.791 kb on + strand at 1020.794 kb on + strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.794 kb on - strand at 1020.799 kb on + strand at 1020.799 kb on + strand at 1020.805 kb on + strand at 1020.805 kb on + strand at 1020.805 kb on + strand at 1020.807 kb on + strand at 1020.807 kb on - strand at 1020.813 kb on - strand at 1020.813 kb on - strand at 1020.813 kb on - strand at 1020.818 kb on + strand at 1020.818 kb on + strand at 1020.818 kb on + strand at 1020.823 kb on + strand at 1020.823 kb on + strand at 1020.826 kb on - strand at 1020.826 kb on - strand at 1020.826 kb on - strand at 1020.826 kb on - strand at 1020.826 kb on - strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on + strand at 1020.831 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.839 kb on - strand at 1020.859 kb on - strand at 1020.883 kb on + strand at 1020.890 kb on + strand at 1020.890 kb on + strand at 1020.896 kb on + strand at 1020.898 kb on - strand at 1020.903 kb on - strand at 1020.926 kb on + strand at 1020.932 kb on - strand at 1020.947 kb on + strand at 1020.947 kb on + strand at 1020.947 kb on + strand at 1020.948 kb on + strand at 1020.956 kb on + strand at 1020.980 kb on - strand at 1020.983 kb on + strand at 1020.983 kb on + strand at 1020.989 kb on + strand at 1020.997 kb on - strand at 1020.997 kb on - strand at 1021.004 kb on - strand at 1021.015 kb on + strand at 1021.017 kb on + strand at 1021.017 kb on + strand at 1021.028 kb on + strand at 1021.051 kb on - strand at 1021.062 kb on + strand at 1021.063 kb on - strand at 1021.063 kb on - strand at 1021.078 kb on - strand at 1021.096 kb on - strand at 1021.106 kb on + strand at 1021.132 kb on + strand at 1021.139 kb on - strand at 1021.139 kb on - strand at 1021.147 kb on - strand at 1021.147 kb on - strand at 1021.163 kb on - strand at 1021.171 kb on - strand at 1021.171 kb on - strand at 1021.171 kb on - strand at 1021.173 kb on - strand at 1021.174 kb on + strand at 1021.184 kb on + strand at 1021.197 kb on + strand at 1021.197 kb on + strand at 1021.199 kb on + strand at 1021.207 kb on - strand at 1021.209 kb on + strand at 1021.217 kb on - strand at 1021.277 kb on - strand at 1021.287 kb on - strand at 1021.318 kb on + strand at 1021.332 kb on - strand at 1021.335 kb on + strand at 1021.372 kb on + strand at 1021.408 kb on + strand at 1021.408 kb on + strand at 1021.416 kb on - strand at 1021.416 kb on - strand at 1021.459 kb on - strand at 1021.461 kb on + strand at 1021.469 kb on - strand at 1021.583 kb on + strand at 1021.591 kb on - strand at 1021.907 kb on - strand at 1021.909 kb on + strand at 1021.925 kb on + strand at 1021.933 kb on - strand at 1021.973 kb on + strand at 1021.981 kb on - strand at 1021.981 kb on - strand at 1022.008 kb on + strand at 1022.008 kb on + strand at 1022.016 kb on - strand at 1022.018 kb on + strand at 1022.025 kb on + strand at 1022.033 kb on - strand at 1022.090 kb on - strand at 1022.101 kb on + strand at 1022.134 kb on - strand at 1022.157 kb on + strand at 1022.186 kb on - strand at 1022.246 kb on + strand, within Dshi_0993 at 1022.288 kb on - strand, within Dshi_0993 at 1022.335 kb on + strand, within Dshi_0993 at 1022.375 kb on + strand, within Dshi_0993 at 1022.396 kb on + strand, within Dshi_0993 at 1022.405 kb on - strand, within Dshi_0993 at 1022.435 kb on + strand, within Dshi_0993 at 1022.442 kb on + strand, within Dshi_0993 at 1022.465 kb on - strand, within Dshi_0993 at 1022.470 kb on - strand, within Dshi_0993 at 1022.482 kb on + strand, within Dshi_0993 at 1022.507 kb on + strand, within Dshi_0993 at 1022.545 kb on - strand, within Dshi_0993 at 1022.553 kb on - strand, within Dshi_0993 at 1022.582 kb on + strand, within Dshi_0993 at 1022.590 kb on - strand, within Dshi_0993 at 1022.645 kb on - strand, within Dshi_0993 at 1022.694 kb on - strand, within Dshi_0993 at 1022.717 kb on + strand, within Dshi_0993 at 1022.724 kb on - strand, within Dshi_0993 at 1022.732 kb on + strand, within Dshi_0993 at 1022.735 kb on - strand, within Dshi_0993
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 1,020,732 - +1.3 1,020,732 - +0.2 1,020,736 - +1.0 1,020,738 + +2.4 1,020,738 + +1.7 1,020,738 + +1.7 1,020,738 + +4.3 1,020,738 + +1.4 1,020,738 - -0.2 1,020,746 - -1.0 1,020,746 - -2.0 1,020,751 + +0.3 1,020,751 + -0.9 1,020,751 + -2.6 1,020,759 - +0.2 1,020,762 + -0.7 1,020,767 + -0.4 1,020,772 + -0.5 1,020,779 + -1.2 1,020,779 + -0.5 1,020,779 + -0.0 1,020,780 - +0.2 1,020,785 + +0.6 1,020,786 + +0.3 1,020,786 + -1.1 1,020,786 + -1.0 1,020,786 + -3.1 1,020,787 - -3.3 1,020,787 - -0.0 1,020,791 + +1.1 1,020,791 + +0.0 1,020,794 + -0.0 1,020,794 - +1.5 1,020,794 - -1.6 1,020,794 - -2.4 1,020,794 - +0.2 1,020,794 - -0.5 1,020,794 - -1.2 1,020,794 - -0.0 1,020,794 - -3.3 1,020,794 - +1.2 1,020,794 - -0.2 1,020,799 + +1.7 1,020,799 + +2.6 1,020,805 + -0.3 1,020,805 + +4.6 1,020,805 + -0.9 1,020,807 + +0.1 1,020,807 - -2.9 1,020,813 - +2.3 1,020,813 - -0.3 1,020,813 - -1.3 1,020,818 + +0.7 1,020,818 + -2.5 1,020,818 + +1.3 1,020,823 + -0.0 1,020,823 + +0.4 1,020,826 - +0.3 1,020,826 - +0.3 1,020,826 - -0.1 1,020,826 - +1.4 1,020,826 - +1.7 1,020,831 + -1.3 1,020,831 + +2.3 1,020,831 + +1.4 1,020,831 + +2.6 1,020,831 + +0.0 1,020,831 + -3.3 1,020,831 + +0.1 1,020,831 + +1.1 1,020,831 + -2.9 1,020,831 + -0.7 1,020,831 + -3.1 1,020,831 + -1.0 1,020,831 + -1.8 1,020,831 + +1.4 1,020,831 - -0.5 1,020,839 - +2.3 1,020,839 - -0.8 1,020,839 - -0.9 1,020,839 - +4.3 1,020,839 - -2.1 1,020,839 - +1.0 1,020,839 - -1.1 1,020,839 - +0.7 1,020,839 - +0.7 1,020,839 - -0.4 1,020,859 - +1.7 1,020,883 + -1.4 1,020,890 + -0.3 1,020,890 + +0.4 1,020,896 + -1.6 1,020,898 - +0.1 1,020,903 - -0.4 1,020,926 + +2.1 1,020,932 - +0.7 1,020,947 + -0.4 1,020,947 + -0.7 1,020,947 + +0.3 1,020,948 + +0.1 1,020,956 + +2.4 1,020,980 - -1.9 1,020,983 + -2.6 1,020,983 + -1.7 1,020,989 + -0.4 1,020,997 - +2.3 1,020,997 - +0.3 1,021,004 - -0.5 1,021,015 + +1.3 1,021,017 + -2.1 1,021,017 + -0.6 1,021,028 + -1.6 1,021,051 - -0.3 1,021,062 + -1.1 1,021,063 - +2.7 1,021,063 - +0.0 1,021,078 - -2.2 1,021,096 - +0.1 1,021,106 + -0.9 1,021,132 + -0.3 1,021,139 - +1.7 1,021,139 - +2.7 1,021,147 - +0.8 1,021,147 - -2.3 1,021,163 - -1.3 1,021,171 - +2.0 1,021,171 - +0.7 1,021,171 - +2.7 1,021,173 - +0.3 1,021,174 + +0.6 1,021,184 + +0.3 1,021,197 + +0.5 1,021,197 + +1.9 1,021,199 + +0.4 1,021,207 - -1.3 1,021,209 + -3.5 1,021,217 - +0.6 1,021,277 - +1.2 1,021,287 - +0.8 1,021,318 + -2.0 1,021,332 - -0.5 1,021,335 + -2.7 1,021,372 + -3.5 1,021,408 + -0.7 1,021,408 + +0.4 1,021,416 - +0.7 1,021,416 - +0.7 1,021,459 - -0.8 1,021,461 + +0.4 1,021,469 - +0.4 1,021,583 + -0.6 1,021,591 - -2.4 1,021,907 - -0.0 1,021,909 + +2.3 1,021,925 + -0.3 1,021,933 - -0.4 1,021,973 + -1.5 1,021,981 - +0.0 1,021,981 - -2.1 1,022,008 + -0.9 1,022,008 + -1.0 1,022,016 - +1.4 1,022,018 + -1.5 1,022,025 + +1.3 1,022,033 - +0.1 1,022,090 - +0.8 1,022,101 + -2.3 1,022,134 - +0.3 1,022,157 + +1.8 1,022,186 - -0.8 1,022,246 + Dshi_0993 0.14 +3.0 1,022,288 - Dshi_0993 0.18 +0.9 1,022,335 + Dshi_0993 0.23 +0.7 1,022,375 + Dshi_0993 0.27 -0.3 1,022,396 + Dshi_0993 0.29 -3.1 1,022,405 - Dshi_0993 0.30 +0.6 1,022,435 + Dshi_0993 0.33 -0.0 1,022,442 + Dshi_0993 0.34 -1.4 1,022,465 - Dshi_0993 0.36 -0.9 1,022,470 - Dshi_0993 0.37 +0.7 1,022,482 + Dshi_0993 0.38 -1.3 1,022,507 + Dshi_0993 0.41 -0.3 1,022,545 - Dshi_0993 0.45 +4.6 1,022,553 - Dshi_0993 0.45 -3.2 1,022,582 + Dshi_0993 0.48 -1.8 1,022,590 - Dshi_0993 0.49 +1.4 1,022,645 - Dshi_0993 0.55 +3.2 1,022,694 - Dshi_0993 0.60 +1.0 1,022,717 + Dshi_0993 0.62 +0.7 1,022,724 - Dshi_0993 0.63 +0.3 1,022,732 + Dshi_0993 0.64 +0.0 1,022,735 - Dshi_0993 0.64 -0.7
Or see this region's nucleotide sequence