Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0894 and Dshi_0895 are separated by 389 nucleotides Dshi_0895 and Dshi_0896 are separated by 9 nucleotides
Dshi_0894: Dshi_0894 - Peptidoglycan-binding domain 1 protein (RefSeq), at 910,592 to 911,965
_0894
Dshi_0895: Dshi_0895 - peptidase S1 and S6 chymotrypsin/Hap (RefSeq), at 912,355 to 914,220
_0895
Dshi_0896: Dshi_0896 - hypothetical protein (RefSeq), at 914,230 to 915,495
_0896
Position (kb)
912
913
914
915 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 911.424 kb on + strand, within Dshi_0894 at 911.425 kb on - strand, within Dshi_0894 at 911.425 kb on - strand, within Dshi_0894 at 911.430 kb on - strand, within Dshi_0894 at 911.435 kb on - strand, within Dshi_0894 at 911.594 kb on + strand, within Dshi_0894 at 911.611 kb on + strand, within Dshi_0894 at 911.648 kb on + strand, within Dshi_0894 at 911.669 kb on + strand, within Dshi_0894 at 911.677 kb on - strand, within Dshi_0894 at 911.695 kb on + strand, within Dshi_0894 at 911.698 kb on - strand, within Dshi_0894 at 911.708 kb on - strand, within Dshi_0894 at 911.708 kb on - strand, within Dshi_0894 at 911.732 kb on + strand, within Dshi_0894 at 911.773 kb on + strand, within Dshi_0894 at 911.795 kb on + strand, within Dshi_0894 at 911.801 kb on - strand, within Dshi_0894 at 911.860 kb on + strand at 912.024 kb on - strand at 912.150 kb on - strand at 912.211 kb on + strand at 912.219 kb on - strand at 912.219 kb on - strand at 912.255 kb on - strand at 912.289 kb on - strand at 912.290 kb on - strand at 912.334 kb on - strand at 912.354 kb on - strand at 912.476 kb on - strand at 912.662 kb on - strand, within Dshi_0895 at 912.782 kb on - strand, within Dshi_0895 at 912.816 kb on + strand, within Dshi_0895 at 912.824 kb on - strand, within Dshi_0895 at 912.826 kb on - strand, within Dshi_0895 at 912.826 kb on - strand, within Dshi_0895 at 913.071 kb on + strand, within Dshi_0895 at 913.235 kb on + strand, within Dshi_0895 at 913.246 kb on + strand, within Dshi_0895 at 913.379 kb on + strand, within Dshi_0895 at 913.400 kb on - strand, within Dshi_0895 at 913.494 kb on + strand, within Dshi_0895 at 913.543 kb on - strand, within Dshi_0895 at 913.566 kb on + strand, within Dshi_0895 at 913.587 kb on - strand, within Dshi_0895 at 913.647 kb on + strand, within Dshi_0895 at 913.708 kb on - strand, within Dshi_0895 at 913.884 kb on + strand, within Dshi_0895 at 913.902 kb on + strand, within Dshi_0895 at 913.957 kb on + strand, within Dshi_0895 at 913.983 kb on - strand, within Dshi_0895 at 913.986 kb on + strand, within Dshi_0895 at 914.032 kb on + strand, within Dshi_0895 at 914.050 kb on - strand at 914.255 kb on - strand at 914.300 kb on + strand at 914.300 kb on + strand at 914.367 kb on + strand, within Dshi_0896 at 914.526 kb on - strand, within Dshi_0896 at 914.563 kb on + strand, within Dshi_0896 at 914.580 kb on + strand, within Dshi_0896 at 914.580 kb on + strand, within Dshi_0896 at 914.646 kb on - strand, within Dshi_0896 at 914.799 kb on + strand at 914.799 kb on + strand, within Dshi_0896 at 914.916 kb on + strand, within Dshi_0896 at 914.916 kb on + strand, within Dshi_0896 at 915.162 kb on + strand, within Dshi_0896 at 915.170 kb on - strand, within Dshi_0896
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 911,424 + Dshi_0894 0.61 +0.8 911,425 - Dshi_0894 0.61 -0.6 911,425 - Dshi_0894 0.61 +4.3 911,430 - Dshi_0894 0.61 -1.2 911,435 - Dshi_0894 0.61 +0.8 911,594 + Dshi_0894 0.73 -0.8 911,611 + Dshi_0894 0.74 -0.2 911,648 + Dshi_0894 0.77 -1.2 911,669 + Dshi_0894 0.78 -0.2 911,677 - Dshi_0894 0.79 +0.8 911,695 + Dshi_0894 0.80 -1.5 911,698 - Dshi_0894 0.80 -2.5 911,708 - Dshi_0894 0.81 -2.4 911,708 - Dshi_0894 0.81 -0.2 911,732 + Dshi_0894 0.83 +0.5 911,773 + Dshi_0894 0.86 -1.5 911,795 + Dshi_0894 0.88 -0.8 911,801 - Dshi_0894 0.88 -1.9 911,860 + +1.2 912,024 - -3.0 912,150 - +0.8 912,211 + +0.5 912,219 - -0.2 912,219 - -1.2 912,255 - +0.8 912,289 - -0.2 912,290 - +0.8 912,334 - +1.8 912,354 - +2.8 912,476 - +0.8 912,662 - Dshi_0895 0.16 +0.8 912,782 - Dshi_0895 0.23 +3.6 912,816 + Dshi_0895 0.25 +2.8 912,824 - Dshi_0895 0.25 +2.4 912,826 - Dshi_0895 0.25 +0.8 912,826 - Dshi_0895 0.25 +0.8 913,071 + Dshi_0895 0.38 +0.8 913,235 + Dshi_0895 0.47 -0.4 913,246 + Dshi_0895 0.48 -0.0 913,379 + Dshi_0895 0.55 +0.8 913,400 - Dshi_0895 0.56 -1.0 913,494 + Dshi_0895 0.61 -0.8 913,543 - Dshi_0895 0.64 +0.8 913,566 + Dshi_0895 0.65 +1.8 913,587 - Dshi_0895 0.66 +0.8 913,647 + Dshi_0895 0.69 -0.2 913,708 - Dshi_0895 0.73 -0.2 913,884 + Dshi_0895 0.82 -1.2 913,902 + Dshi_0895 0.83 +0.5 913,957 + Dshi_0895 0.86 +2.4 913,983 - Dshi_0895 0.87 +2.8 913,986 + Dshi_0895 0.87 +0.8 914,032 + Dshi_0895 0.90 +0.8 914,050 - +0.8 914,255 - +0.8 914,300 + -0.2 914,300 + +0.5 914,367 + Dshi_0896 0.11 +0.8 914,526 - Dshi_0896 0.23 +1.8 914,563 + Dshi_0896 0.26 +2.7 914,580 + Dshi_0896 0.28 +0.8 914,580 + Dshi_0896 0.28 +0.8 914,646 - Dshi_0896 0.33 -0.2 914,799 + +0.8 914,799 + Dshi_0896 0.45 -2.4 914,916 + Dshi_0896 0.54 +0.8 914,916 + Dshi_0896 0.54 -1.0 915,162 + Dshi_0896 0.74 +0.2 915,170 - Dshi_0896 0.74 -1.3
Or see this region's nucleotide sequence