Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0776 and Dshi_0777 overlap by 16 nucleotides Dshi_0777 and Dshi_0778 are separated by 128 nucleotides Dshi_0778 and Dshi_0779 are separated by 120 nucleotides
Dshi_0776: Dshi_0776 - cobalamin B12-binding domain protein (RefSeq), at 781,394 to 782,179
_0776
Dshi_0777: Dshi_0777 - threonyl-tRNA synthetase (RefSeq), at 782,164 to 784,128
_0777
Dshi_0778: Dshi_0778 - hypothetical protein (RefSeq), at 784,257 to 784,445
_0778
Dshi_0779: Dshi_0779 - transcriptional regulator, MarR family with acetyltransferase activity (RefSeq), at 784,566 to 785,522
_0779
Position (kb) 782
783
784
785 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 781.395 kb on + strand at 781.569 kb on + strand, within Dshi_0776 at 781.645 kb on - strand, within Dshi_0776 at 781.709 kb on + strand, within Dshi_0776 at 782.003 kb on - strand, within Dshi_0776 at 782.113 kb on - strand at 782.190 kb on + strand at 784.255 kb on + strand at 784.255 kb on + strand at 784.291 kb on + strand, within Dshi_0778 at 784.451 kb on - strand at 784.459 kb on - strand at 784.567 kb on - strand at 784.882 kb on - strand, within Dshi_0779 at 785.031 kb on - strand, within Dshi_0779
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 781,395 + +0.3 781,569 + Dshi_0776 0.22 +2.8 781,645 - Dshi_0776 0.32 -0.0 781,709 + Dshi_0776 0.40 -1.6 782,003 - Dshi_0776 0.77 -1.3 782,113 - +0.5 782,190 + -1.2 784,255 + -2.1 784,255 + -0.5 784,291 + Dshi_0778 0.18 -0.6 784,451 - +0.8 784,459 - +1.8 784,567 - -0.7 784,882 - Dshi_0779 0.33 -1.2 785,031 - Dshi_0779 0.49 -2.7
Or see this region's nucleotide sequence