Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0507 and Dshi_0508 are separated by 183 nucleotides Dshi_0508 and Dshi_0509 are separated by 93 nucleotides
Dshi_0507: Dshi_0507 - MRP-like protein (ATP/GTP-binding protein) (RefSeq), at 492,087 to 493,133
_0507
Dshi_0508: Dshi_0508 - cytochrome c class I (RefSeq), at 493,317 to 494,531
_0508
Dshi_0509: Dshi_0509 - hypothetical protein (RefSeq), at 494,625 to 495,407
_0509
Position (kb) 493
494
495 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 492.335 kb on + strand, within Dshi_0507 at 492.399 kb on + strand, within Dshi_0507 at 492.480 kb on - strand, within Dshi_0507 at 492.602 kb on + strand, within Dshi_0507 at 492.610 kb on - strand, within Dshi_0507 at 492.675 kb on - strand, within Dshi_0507 at 492.776 kb on - strand, within Dshi_0507 at 492.777 kb on - strand, within Dshi_0507 at 492.820 kb on - strand, within Dshi_0507 at 492.950 kb on + strand, within Dshi_0507 at 492.985 kb on - strand, within Dshi_0507 at 492.998 kb on + strand, within Dshi_0507 at 493.021 kb on + strand, within Dshi_0507 at 493.043 kb on + strand at 493.066 kb on - strand at 493.215 kb on - strand at 493.243 kb on - strand at 493.335 kb on - strand at 493.359 kb on + strand at 493.418 kb on + strand at 493.597 kb on + strand, within Dshi_0508 at 493.615 kb on - strand, within Dshi_0508 at 493.720 kb on + strand, within Dshi_0508 at 493.787 kb on - strand, within Dshi_0508 at 493.800 kb on + strand, within Dshi_0508 at 493.831 kb on + strand, within Dshi_0508 at 493.893 kb on + strand, within Dshi_0508 at 493.901 kb on - strand, within Dshi_0508 at 493.965 kb on + strand, within Dshi_0508 at 494.022 kb on + strand, within Dshi_0508 at 494.058 kb on - strand, within Dshi_0508 at 494.067 kb on - strand, within Dshi_0508 at 494.103 kb on - strand, within Dshi_0508 at 494.197 kb on - strand, within Dshi_0508 at 494.236 kb on + strand, within Dshi_0508 at 494.236 kb on + strand, within Dshi_0508 at 494.236 kb on + strand, within Dshi_0508 at 494.266 kb on + strand, within Dshi_0508 at 494.280 kb on - strand, within Dshi_0508 at 494.302 kb on + strand, within Dshi_0508 at 494.302 kb on + strand, within Dshi_0508 at 494.310 kb on - strand, within Dshi_0508 at 494.370 kb on + strand, within Dshi_0508 at 494.378 kb on - strand, within Dshi_0508 at 494.425 kb on - strand at 494.436 kb on - strand at 494.458 kb on + strand at 494.468 kb on - strand at 494.559 kb on + strand at 494.559 kb on + strand at 494.577 kb on - strand at 494.623 kb on + strand at 494.655 kb on + strand at 494.697 kb on - strand at 494.742 kb on + strand, within Dshi_0509 at 494.793 kb on + strand, within Dshi_0509 at 494.866 kb on - strand, within Dshi_0509 at 494.926 kb on + strand, within Dshi_0509 at 494.948 kb on + strand, within Dshi_0509 at 495.121 kb on - strand, within Dshi_0509 at 495.131 kb on - strand, within Dshi_0509 at 495.154 kb on - strand, within Dshi_0509 at 495.156 kb on + strand, within Dshi_0509 at 495.166 kb on - strand, within Dshi_0509 at 495.203 kb on + strand, within Dshi_0509 at 495.211 kb on - strand, within Dshi_0509 at 495.213 kb on + strand, within Dshi_0509 at 495.216 kb on + strand, within Dshi_0509 at 495.218 kb on + strand, within Dshi_0509 at 495.309 kb on + strand, within Dshi_0509 at 495.391 kb on + strand at 495.526 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 492,335 + Dshi_0507 0.24 -0.3 492,399 + Dshi_0507 0.30 +0.7 492,480 - Dshi_0507 0.38 -1.3 492,602 + Dshi_0507 0.49 +0.7 492,610 - Dshi_0507 0.50 -3.6 492,675 - Dshi_0507 0.56 -2.2 492,776 - Dshi_0507 0.66 -0.5 492,777 - Dshi_0507 0.66 -0.7 492,820 - Dshi_0507 0.70 +0.3 492,950 + Dshi_0507 0.82 -0.1 492,985 - Dshi_0507 0.86 +0.9 492,998 + Dshi_0507 0.87 -0.1 493,021 + Dshi_0507 0.89 -0.8 493,043 + -2.7 493,066 - +0.7 493,215 - -1.8 493,243 - -1.7 493,335 - +1.8 493,359 + +1.5 493,418 + +0.4 493,597 + Dshi_0508 0.23 -0.2 493,615 - Dshi_0508 0.25 -3.0 493,720 + Dshi_0508 0.33 -0.3 493,787 - Dshi_0508 0.39 -3.1 493,800 + Dshi_0508 0.40 +0.9 493,831 + Dshi_0508 0.42 +1.5 493,893 + Dshi_0508 0.47 +0.4 493,901 - Dshi_0508 0.48 -3.2 493,965 + Dshi_0508 0.53 -0.1 494,022 + Dshi_0508 0.58 -2.5 494,058 - Dshi_0508 0.61 +0.6 494,067 - Dshi_0508 0.62 +0.2 494,103 - Dshi_0508 0.65 -0.3 494,197 - Dshi_0508 0.72 +1.7 494,236 + Dshi_0508 0.76 +1.8 494,236 + Dshi_0508 0.76 +0.2 494,236 + Dshi_0508 0.76 +1.3 494,266 + Dshi_0508 0.78 +0.4 494,280 - Dshi_0508 0.79 -0.1 494,302 + Dshi_0508 0.81 +0.8 494,302 + Dshi_0508 0.81 -3.7 494,310 - Dshi_0508 0.82 -3.0 494,370 + Dshi_0508 0.87 -1.4 494,378 - Dshi_0508 0.87 +1.3 494,425 - -1.9 494,436 - +3.7 494,458 + +1.9 494,468 - -0.3 494,559 + -3.1 494,559 + +1.4 494,577 - +0.8 494,623 + -1.8 494,655 + +1.7 494,697 - +0.2 494,742 + Dshi_0509 0.15 +1.2 494,793 + Dshi_0509 0.21 -0.1 494,866 - Dshi_0509 0.31 +0.9 494,926 + Dshi_0509 0.38 +0.2 494,948 + Dshi_0509 0.41 +1.2 495,121 - Dshi_0509 0.63 -1.0 495,131 - Dshi_0509 0.65 +0.6 495,154 - Dshi_0509 0.68 +3.9 495,156 + Dshi_0509 0.68 -0.8 495,166 - Dshi_0509 0.69 +0.0 495,203 + Dshi_0509 0.74 +0.4 495,211 - Dshi_0509 0.75 -0.3 495,213 + Dshi_0509 0.75 -0.2 495,216 + Dshi_0509 0.75 -3.3 495,218 + Dshi_0509 0.76 -1.2 495,309 + Dshi_0509 0.87 -1.5 495,391 + -0.4 495,526 - +1.1
Or see this region's nucleotide sequence