Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0499 and Dshi_0500 overlap by 1 nucleotides Dshi_0500 and Dshi_0501 overlap by 4 nucleotides Dshi_0501 and Dshi_0502 are separated by 115 nucleotides
Dshi_0499: Dshi_0499 - hypothetical protein (RefSeq), at 484,107 to 485,120
_0499
Dshi_0500: Dshi_0500 - molybdopterin-guanine dinucleotide biosynthesis protein A (RefSeq), at 485,120 to 485,656
_0500
Dshi_0501: Dshi_0501 - hypothetical protein (RefSeq), at 485,653 to 486,264
_0501
Dshi_0502: Dshi_0502 - cytoplasmic chaperone TorD family protein (RefSeq), at 486,380 to 487,042
_0502
Position (kb) 485
486 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 484.156 kb on - strand at 484.183 kb on + strand at 484.191 kb on - strand at 484.227 kb on + strand, within Dshi_0499 at 484.245 kb on - strand, within Dshi_0499 at 484.268 kb on + strand, within Dshi_0499 at 484.323 kb on + strand, within Dshi_0499 at 484.373 kb on + strand, within Dshi_0499 at 484.378 kb on + strand, within Dshi_0499 at 484.378 kb on - strand, within Dshi_0499 at 484.401 kb on + strand, within Dshi_0499 at 484.402 kb on + strand, within Dshi_0499 at 484.402 kb on + strand, within Dshi_0499 at 484.405 kb on - strand, within Dshi_0499 at 484.407 kb on - strand, within Dshi_0499 at 484.407 kb on - strand, within Dshi_0499 at 484.407 kb on - strand, within Dshi_0499 at 484.415 kb on + strand, within Dshi_0499 at 484.458 kb on + strand, within Dshi_0499 at 484.467 kb on + strand, within Dshi_0499 at 484.480 kb on - strand, within Dshi_0499 at 484.497 kb on + strand, within Dshi_0499 at 484.501 kb on + strand, within Dshi_0499 at 484.508 kb on - strand, within Dshi_0499 at 484.509 kb on - strand, within Dshi_0499 at 484.509 kb on - strand, within Dshi_0499 at 484.509 kb on - strand, within Dshi_0499 at 484.509 kb on - strand, within Dshi_0499 at 484.526 kb on - strand, within Dshi_0499 at 484.549 kb on + strand, within Dshi_0499 at 484.566 kb on - strand, within Dshi_0499 at 484.571 kb on - strand, within Dshi_0499 at 484.576 kb on - strand, within Dshi_0499 at 484.592 kb on - strand, within Dshi_0499 at 484.655 kb on - strand, within Dshi_0499 at 484.655 kb on - strand, within Dshi_0499 at 484.655 kb on - strand, within Dshi_0499 at 484.657 kb on + strand, within Dshi_0499 at 484.662 kb on + strand, within Dshi_0499 at 484.665 kb on - strand, within Dshi_0499 at 484.665 kb on - strand, within Dshi_0499 at 484.690 kb on - strand, within Dshi_0499 at 484.690 kb on - strand, within Dshi_0499 at 484.693 kb on + strand, within Dshi_0499 at 484.702 kb on + strand, within Dshi_0499 at 484.718 kb on - strand, within Dshi_0499 at 484.727 kb on + strand, within Dshi_0499 at 484.735 kb on - strand, within Dshi_0499 at 484.738 kb on - strand, within Dshi_0499 at 484.741 kb on + strand, within Dshi_0499 at 484.741 kb on + strand, within Dshi_0499 at 484.741 kb on + strand, within Dshi_0499 at 484.742 kb on + strand, within Dshi_0499 at 484.742 kb on + strand, within Dshi_0499 at 484.749 kb on - strand, within Dshi_0499 at 484.750 kb on - strand, within Dshi_0499 at 484.758 kb on + strand, within Dshi_0499 at 484.758 kb on + strand, within Dshi_0499 at 484.766 kb on - strand, within Dshi_0499 at 484.766 kb on - strand, within Dshi_0499 at 484.766 kb on - strand, within Dshi_0499 at 484.789 kb on - strand, within Dshi_0499 at 484.799 kb on + strand, within Dshi_0499 at 484.799 kb on - strand, within Dshi_0499 at 484.805 kb on + strand, within Dshi_0499 at 484.813 kb on + strand, within Dshi_0499 at 484.813 kb on + strand, within Dshi_0499 at 484.821 kb on - strand, within Dshi_0499 at 484.821 kb on - strand, within Dshi_0499 at 484.831 kb on - strand, within Dshi_0499 at 484.831 kb on - strand, within Dshi_0499 at 484.840 kb on + strand, within Dshi_0499 at 484.868 kb on + strand, within Dshi_0499 at 484.876 kb on - strand, within Dshi_0499 at 484.879 kb on + strand, within Dshi_0499 at 484.887 kb on - strand, within Dshi_0499 at 484.887 kb on - strand, within Dshi_0499 at 484.984 kb on - strand, within Dshi_0499 at 485.013 kb on + strand, within Dshi_0499 at 485.023 kb on + strand at 485.029 kb on + strand at 485.115 kb on + strand at 485.122 kb on - strand at 485.123 kb on - strand at 485.123 kb on - strand at 485.123 kb on - strand at 485.123 kb on - strand at 485.144 kb on + strand at 485.237 kb on - strand at 485.237 kb on - strand, within Dshi_0500 at 485.354 kb on - strand, within Dshi_0500 at 485.379 kb on + strand, within Dshi_0500 at 485.467 kb on + strand, within Dshi_0500 at 485.485 kb on - strand, within Dshi_0500 at 485.562 kb on + strand, within Dshi_0500 at 485.579 kb on + strand, within Dshi_0500 at 485.755 kb on - strand, within Dshi_0501 at 485.770 kb on - strand, within Dshi_0501 at 485.783 kb on + strand, within Dshi_0501 at 485.783 kb on + strand, within Dshi_0501 at 485.813 kb on - strand, within Dshi_0501 at 485.853 kb on + strand, within Dshi_0501 at 485.912 kb on + strand, within Dshi_0501 at 485.912 kb on + strand, within Dshi_0501 at 485.939 kb on - strand, within Dshi_0501 at 485.947 kb on + strand, within Dshi_0501 at 485.947 kb on + strand, within Dshi_0501 at 485.958 kb on + strand, within Dshi_0501 at 486.014 kb on + strand, within Dshi_0501 at 486.018 kb on + strand, within Dshi_0501 at 486.035 kb on - strand, within Dshi_0501 at 486.059 kb on - strand, within Dshi_0501 at 486.069 kb on + strand, within Dshi_0501 at 486.081 kb on + strand, within Dshi_0501 at 486.089 kb on - strand, within Dshi_0501 at 486.089 kb on - strand, within Dshi_0501 at 486.099 kb on - strand, within Dshi_0501 at 486.126 kb on + strand, within Dshi_0501 at 486.134 kb on - strand, within Dshi_0501 at 486.199 kb on + strand, within Dshi_0501 at 486.214 kb on - strand at 486.267 kb on + strand at 486.371 kb on + strand at 486.393 kb on + strand at 486.398 kb on + strand at 486.398 kb on + strand at 486.398 kb on + strand at 486.398 kb on + strand at 486.398 kb on + strand at 486.398 kb on + strand at 486.398 kb on + strand at 486.398 kb on + strand at 486.403 kb on + strand at 486.403 kb on + strand at 486.403 kb on + strand at 486.406 kb on - strand at 486.406 kb on - strand at 486.406 kb on - strand at 486.406 kb on - strand at 486.406 kb on - strand at 486.406 kb on - strand at 486.411 kb on - strand at 486.411 kb on - strand at 486.511 kb on - strand, within Dshi_0502 at 486.533 kb on + strand, within Dshi_0502 at 486.533 kb on + strand, within Dshi_0502 at 486.544 kb on + strand, within Dshi_0502 at 486.544 kb on + strand, within Dshi_0502 at 486.552 kb on - strand, within Dshi_0502 at 486.554 kb on + strand, within Dshi_0502 at 486.559 kb on + strand, within Dshi_0502 at 486.562 kb on - strand, within Dshi_0502 at 486.624 kb on - strand, within Dshi_0502 at 486.646 kb on + strand, within Dshi_0502
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 484,156 - +1.0 484,183 + +0.2 484,191 - +0.3 484,227 + Dshi_0499 0.12 -2.3 484,245 - Dshi_0499 0.14 +1.2 484,268 + Dshi_0499 0.16 -1.1 484,323 + Dshi_0499 0.21 -0.2 484,373 + Dshi_0499 0.26 +1.8 484,378 + Dshi_0499 0.27 -2.2 484,378 - Dshi_0499 0.27 +1.0 484,401 + Dshi_0499 0.29 -1.4 484,402 + Dshi_0499 0.29 +0.1 484,402 + Dshi_0499 0.29 +0.3 484,405 - Dshi_0499 0.29 -1.0 484,407 - Dshi_0499 0.30 -0.3 484,407 - Dshi_0499 0.30 +2.1 484,407 - Dshi_0499 0.30 -0.0 484,415 + Dshi_0499 0.30 -1.1 484,458 + Dshi_0499 0.35 +3.4 484,467 + Dshi_0499 0.36 +0.2 484,480 - Dshi_0499 0.37 -0.1 484,497 + Dshi_0499 0.38 -1.6 484,501 + Dshi_0499 0.39 +0.3 484,508 - Dshi_0499 0.40 -1.8 484,509 - Dshi_0499 0.40 -2.0 484,509 - Dshi_0499 0.40 +0.6 484,509 - Dshi_0499 0.40 -2.6 484,509 - Dshi_0499 0.40 -0.5 484,526 - Dshi_0499 0.41 -1.2 484,549 + Dshi_0499 0.44 +2.4 484,566 - Dshi_0499 0.45 +0.5 484,571 - Dshi_0499 0.46 +0.2 484,576 - Dshi_0499 0.46 +0.4 484,592 - Dshi_0499 0.48 +0.4 484,655 - Dshi_0499 0.54 +0.5 484,655 - Dshi_0499 0.54 -2.5 484,655 - Dshi_0499 0.54 +1.0 484,657 + Dshi_0499 0.54 +0.8 484,662 + Dshi_0499 0.55 +0.2 484,665 - Dshi_0499 0.55 +1.0 484,665 - Dshi_0499 0.55 +0.8 484,690 - Dshi_0499 0.57 +0.0 484,690 - Dshi_0499 0.57 +0.5 484,693 + Dshi_0499 0.58 -1.5 484,702 + Dshi_0499 0.59 -3.7 484,718 - Dshi_0499 0.60 -0.5 484,727 + Dshi_0499 0.61 -3.8 484,735 - Dshi_0499 0.62 +0.7 484,738 - Dshi_0499 0.62 -0.1 484,741 + Dshi_0499 0.63 -0.5 484,741 + Dshi_0499 0.63 -2.7 484,741 + Dshi_0499 0.63 +1.2 484,742 + Dshi_0499 0.63 -2.1 484,742 + Dshi_0499 0.63 +0.1 484,749 - Dshi_0499 0.63 +0.6 484,750 - Dshi_0499 0.63 -1.7 484,758 + Dshi_0499 0.64 -0.5 484,758 + Dshi_0499 0.64 -1.6 484,766 - Dshi_0499 0.65 +0.2 484,766 - Dshi_0499 0.65 -2.1 484,766 - Dshi_0499 0.65 +1.0 484,789 - Dshi_0499 0.67 -0.1 484,799 + Dshi_0499 0.68 -0.4 484,799 - Dshi_0499 0.68 +0.2 484,805 + Dshi_0499 0.69 -0.3 484,813 + Dshi_0499 0.70 +0.3 484,813 + Dshi_0499 0.70 -0.6 484,821 - Dshi_0499 0.70 +0.5 484,821 - Dshi_0499 0.70 -2.9 484,831 - Dshi_0499 0.71 +0.9 484,831 - Dshi_0499 0.71 -1.8 484,840 + Dshi_0499 0.72 +1.4 484,868 + Dshi_0499 0.75 +5.0 484,876 - Dshi_0499 0.76 -1.2 484,879 + Dshi_0499 0.76 +1.9 484,887 - Dshi_0499 0.77 +0.6 484,887 - Dshi_0499 0.77 +0.5 484,984 - Dshi_0499 0.86 +2.1 485,013 + Dshi_0499 0.89 +0.2 485,023 + +0.3 485,029 + +0.6 485,115 + -3.2 485,122 - -0.3 485,123 - +2.6 485,123 - -0.6 485,123 - +1.8 485,123 - +0.0 485,144 + +0.4 485,237 - +2.7 485,237 - Dshi_0500 0.22 -2.5 485,354 - Dshi_0500 0.44 -2.0 485,379 + Dshi_0500 0.48 -0.2 485,467 + Dshi_0500 0.65 -0.1 485,485 - Dshi_0500 0.68 +2.1 485,562 + Dshi_0500 0.82 -2.5 485,579 + Dshi_0500 0.85 -2.1 485,755 - Dshi_0501 0.17 +2.2 485,770 - Dshi_0501 0.19 -2.9 485,783 + Dshi_0501 0.21 -1.6 485,783 + Dshi_0501 0.21 +0.1 485,813 - Dshi_0501 0.26 +1.0 485,853 + Dshi_0501 0.33 -3.5 485,912 + Dshi_0501 0.42 +0.0 485,912 + Dshi_0501 0.42 -1.7 485,939 - Dshi_0501 0.47 -1.7 485,947 + Dshi_0501 0.48 -0.9 485,947 + Dshi_0501 0.48 -1.6 485,958 + Dshi_0501 0.50 -1.7 486,014 + Dshi_0501 0.59 -2.1 486,018 + Dshi_0501 0.60 -0.6 486,035 - Dshi_0501 0.62 -1.8 486,059 - Dshi_0501 0.66 +0.4 486,069 + Dshi_0501 0.68 +2.4 486,081 + Dshi_0501 0.70 -1.0 486,089 - Dshi_0501 0.71 +0.2 486,089 - Dshi_0501 0.71 +0.7 486,099 - Dshi_0501 0.73 +0.4 486,126 + Dshi_0501 0.77 -3.5 486,134 - Dshi_0501 0.79 +3.3 486,199 + Dshi_0501 0.89 +1.0 486,214 - -1.4 486,267 + +0.0 486,371 + +1.3 486,393 + +1.8 486,398 + +0.1 486,398 + -0.7 486,398 + -0.1 486,398 + +1.5 486,398 + +0.4 486,398 + -1.6 486,398 + -0.3 486,398 + +0.6 486,403 + -4.6 486,403 + -2.4 486,403 + -0.4 486,406 - +0.9 486,406 - +2.1 486,406 - -0.5 486,406 - -3.3 486,406 - +0.4 486,406 - +1.1 486,411 - -1.2 486,411 - -2.9 486,511 - Dshi_0502 0.20 +0.9 486,533 + Dshi_0502 0.23 -0.2 486,533 + Dshi_0502 0.23 -2.2 486,544 + Dshi_0502 0.25 +0.2 486,544 + Dshi_0502 0.25 +0.6 486,552 - Dshi_0502 0.26 -2.5 486,554 + Dshi_0502 0.26 -1.5 486,559 + Dshi_0502 0.27 +0.6 486,562 - Dshi_0502 0.27 -0.7 486,624 - Dshi_0502 0.37 +0.5 486,646 + Dshi_0502 0.40 -0.8
Or see this region's nucleotide sequence