Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0435 and Dshi_0436 overlap by 4 nucleotides Dshi_0436 and Dshi_0437 overlap by 4 nucleotides Dshi_0437 and Dshi_0438 overlap by 4 nucleotides Dshi_0438 and Dshi_0439 overlap by 10 nucleotides
Dshi_0435: Dshi_0435 - ATP synthase F1, beta subunit (RefSeq), at 427,117 to 428,505
_0435
Dshi_0436: Dshi_0436 - ATP synthase F1, epsilon subunit (RefSeq), at 428,502 to 428,912
_0436
Dshi_0437: Dshi_0437 - F0F1-ATPase subunit, putative (RefSeq), at 428,909 to 429,196
_0437
Dshi_0438: Dshi_0438 - hypothetical protein (RefSeq), at 429,193 to 429,498
_0438
Dshi_0439: Dshi_0439 - ATP synthase F0, A subunit (RefSeq), at 429,489 to 430,178
_0439
Position (kb) 428
429 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 427.561 kb on + strand, within Dshi_0435 at 427.564 kb on - strand, within Dshi_0435 at 427.582 kb on - strand at 427.640 kb on + strand, within Dshi_0435 at 427.650 kb on + strand, within Dshi_0435 at 427.708 kb on - strand, within Dshi_0435 at 427.709 kb on + strand, within Dshi_0435 at 427.738 kb on - strand, within Dshi_0435 at 427.823 kb on + strand, within Dshi_0435 at 427.842 kb on - strand, within Dshi_0435 at 427.897 kb on - strand, within Dshi_0435 at 427.960 kb on + strand, within Dshi_0435 at 428.071 kb on + strand, within Dshi_0435 at 428.113 kb on - strand, within Dshi_0435 at 428.114 kb on + strand, within Dshi_0435 at 428.139 kb on + strand, within Dshi_0435 at 428.162 kb on + strand, within Dshi_0435 at 428.209 kb on + strand, within Dshi_0435 at 428.264 kb on - strand, within Dshi_0435 at 428.278 kb on + strand, within Dshi_0435 at 428.278 kb on + strand, within Dshi_0435 at 428.286 kb on - strand, within Dshi_0435 at 428.312 kb on + strand, within Dshi_0435 at 428.405 kb on + strand at 428.530 kb on + strand at 428.571 kb on - strand, within Dshi_0436 at 428.781 kb on - strand, within Dshi_0436 at 428.831 kb on - strand, within Dshi_0436 at 428.957 kb on + strand, within Dshi_0437 at 429.079 kb on - strand, within Dshi_0437 at 429.183 kb on - strand at 429.273 kb on + strand, within Dshi_0438 at 429.281 kb on - strand, within Dshi_0438 at 429.330 kb on + strand, within Dshi_0438 at 429.332 kb on + strand, within Dshi_0438 at 429.342 kb on + strand, within Dshi_0438 at 429.411 kb on - strand, within Dshi_0438 at 429.492 kb on + strand at 429.533 kb on - strand at 429.587 kb on - strand, within Dshi_0439 at 429.607 kb on + strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.615 kb on - strand, within Dshi_0439 at 429.652 kb on + strand, within Dshi_0439 at 429.749 kb on + strand, within Dshi_0439 at 429.760 kb on + strand, within Dshi_0439 at 429.775 kb on + strand, within Dshi_0439 at 429.778 kb on - strand, within Dshi_0439 at 429.787 kb on + strand, within Dshi_0439 at 429.810 kb on + strand, within Dshi_0439 at 429.882 kb on - strand, within Dshi_0439 at 429.904 kb on + strand, within Dshi_0439
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 427,561 + Dshi_0435 0.32 -2.5 427,564 - Dshi_0435 0.32 -1.5 427,582 - +0.5 427,640 + Dshi_0435 0.38 -3.4 427,650 + Dshi_0435 0.38 -2.3 427,708 - Dshi_0435 0.43 +2.5 427,709 + Dshi_0435 0.43 -0.2 427,738 - Dshi_0435 0.45 -3.2 427,823 + Dshi_0435 0.51 +0.5 427,842 - Dshi_0435 0.52 +1.9 427,897 - Dshi_0435 0.56 +3.5 427,960 + Dshi_0435 0.61 +0.9 428,071 + Dshi_0435 0.69 -2.2 428,113 - Dshi_0435 0.72 -2.1 428,114 + Dshi_0435 0.72 -1.5 428,139 + Dshi_0435 0.74 -2.3 428,162 + Dshi_0435 0.75 -1.5 428,209 + Dshi_0435 0.79 +0.6 428,264 - Dshi_0435 0.83 +0.1 428,278 + Dshi_0435 0.84 -0.4 428,278 + Dshi_0435 0.84 -0.8 428,286 - Dshi_0435 0.84 -1.8 428,312 + Dshi_0435 0.86 -1.1 428,405 + -0.8 428,530 + +0.5 428,571 - Dshi_0436 0.17 -1.5 428,781 - Dshi_0436 0.68 -3.1 428,831 - Dshi_0436 0.80 -0.1 428,957 + Dshi_0437 0.17 -5.0 429,079 - Dshi_0437 0.59 -2.1 429,183 - -1.7 429,273 + Dshi_0438 0.26 -0.3 429,281 - Dshi_0438 0.29 -2.1 429,330 + Dshi_0438 0.45 -0.3 429,332 + Dshi_0438 0.45 -0.2 429,342 + Dshi_0438 0.49 +0.9 429,411 - Dshi_0438 0.71 -0.9 429,492 + -0.8 429,533 - -0.6 429,587 - Dshi_0439 0.14 +0.5 429,607 + Dshi_0439 0.17 -0.7 429,615 - Dshi_0439 0.18 -0.5 429,615 - Dshi_0439 0.18 -0.6 429,615 - Dshi_0439 0.18 +0.5 429,615 - Dshi_0439 0.18 -2.8 429,652 + Dshi_0439 0.24 -1.0 429,749 + Dshi_0439 0.38 -2.8 429,760 + Dshi_0439 0.39 -0.5 429,775 + Dshi_0439 0.41 +3.1 429,778 - Dshi_0439 0.42 -1.2 429,787 + Dshi_0439 0.43 -2.9 429,810 + Dshi_0439 0.47 +0.5 429,882 - Dshi_0439 0.57 -1.7 429,904 + Dshi_0439 0.60 -3.0
Or see this region's nucleotide sequence