Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0424 and Dshi_0426 are separated by 921 nucleotides Dshi_0426 and Dshi_0427 are separated by 147 nucleotides Dshi_0427 and Dshi_0428 are separated by 19 nucleotides
Dshi_0424: Dshi_0424 - peptidase M41 (RefSeq), at 417,105 to 417,566
_0424
Dshi_0426: Dshi_0426 - hypothetical protein (RefSeq), at 418,488 to 418,850
_0426
Dshi_0427: Dshi_0427 - hypothetical protein (RefSeq), at 418,998 to 419,249
_0427
Dshi_0428: Dshi_0428 - Poly-beta-hydroxybutyrate polymerase domain protein (RefSeq), at 419,269 to 421,152
_0428
Position (kb) 418
419 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 417.572 kb on + strand at 417.572 kb on + strand at 417.578 kb on - strand at 417.580 kb on - strand at 417.632 kb on - strand at 417.701 kb on - strand at 417.816 kb on + strand at 417.824 kb on - strand at 417.829 kb on + strand at 417.837 kb on - strand at 417.856 kb on - strand at 417.864 kb on - strand at 417.936 kb on + strand at 417.958 kb on + strand at 418.075 kb on + strand at 418.083 kb on - strand at 418.090 kb on - strand at 418.103 kb on - strand at 418.139 kb on + strand at 418.158 kb on - strand at 418.225 kb on - strand at 418.263 kb on + strand at 418.377 kb on + strand at 418.450 kb on - strand at 418.533 kb on - strand, within Dshi_0426 at 418.562 kb on + strand, within Dshi_0426 at 418.563 kb on + strand, within Dshi_0426 at 418.654 kb on + strand, within Dshi_0426 at 418.661 kb on - strand, within Dshi_0426 at 418.685 kb on - strand, within Dshi_0426 at 418.695 kb on - strand, within Dshi_0426 at 418.714 kb on - strand, within Dshi_0426 at 418.891 kb on + strand at 418.935 kb on + strand at 418.940 kb on + strand at 418.979 kb on - strand at 419.023 kb on + strand at 419.031 kb on - strand, within Dshi_0427 at 419.047 kb on + strand, within Dshi_0427 at 419.061 kb on + strand, within Dshi_0427 at 419.078 kb on - strand, within Dshi_0427 at 419.107 kb on + strand, within Dshi_0427 at 419.126 kb on + strand, within Dshi_0427 at 419.169 kb on - strand, within Dshi_0427 at 419.261 kb on + strand at 419.306 kb on + strand at 419.334 kb on - strand at 419.357 kb on + strand at 419.358 kb on - strand at 419.528 kb on - strand, within Dshi_0428 at 419.633 kb on + strand, within Dshi_0428 at 419.638 kb on + strand, within Dshi_0428 at 419.643 kb on + strand, within Dshi_0428 at 419.646 kb on - strand, within Dshi_0428 at 419.651 kb on + strand, within Dshi_0428 at 419.760 kb on - strand, within Dshi_0428 at 419.792 kb on + strand, within Dshi_0428 at 419.800 kb on - strand, within Dshi_0428 at 419.814 kb on + strand, within Dshi_0428 at 419.841 kb on + strand, within Dshi_0428
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 417,572 + -0.5 417,572 + +0.5 417,578 - +0.5 417,580 - +1.0 417,632 - -2.2 417,701 - -0.9 417,816 + -0.7 417,824 - -2.8 417,829 + +0.0 417,837 - -2.5 417,856 - +1.0 417,864 - -0.4 417,936 + -0.5 417,958 + -0.9 418,075 + -1.3 418,083 - -0.1 418,090 - +0.1 418,103 - -3.4 418,139 + -1.0 418,158 - -0.3 418,225 - +2.9 418,263 + +3.1 418,377 + +0.5 418,450 - -2.2 418,533 - Dshi_0426 0.12 -1.2 418,562 + Dshi_0426 0.20 +0.5 418,563 + Dshi_0426 0.21 -1.0 418,654 + Dshi_0426 0.46 +0.5 418,661 - Dshi_0426 0.48 -1.8 418,685 - Dshi_0426 0.54 -1.5 418,695 - Dshi_0426 0.57 +1.5 418,714 - Dshi_0426 0.62 -1.5 418,891 + -3.3 418,935 + -0.7 418,940 + -2.3 418,979 - +0.5 419,023 + -2.6 419,031 - Dshi_0427 0.13 +1.5 419,047 + Dshi_0427 0.19 -2.2 419,061 + Dshi_0427 0.25 -0.3 419,078 - Dshi_0427 0.32 +0.5 419,107 + Dshi_0427 0.43 +0.1 419,126 + Dshi_0427 0.51 -1.8 419,169 - Dshi_0427 0.68 -0.5 419,261 + +0.0 419,306 + +0.1 419,334 - -1.1 419,357 + -1.8 419,358 - -0.1 419,528 - Dshi_0428 0.14 +1.5 419,633 + Dshi_0428 0.19 +0.8 419,638 + Dshi_0428 0.20 -0.1 419,643 + Dshi_0428 0.20 -3.3 419,646 - Dshi_0428 0.20 +0.4 419,651 + Dshi_0428 0.20 -1.5 419,760 - Dshi_0428 0.26 +1.5 419,792 + Dshi_0428 0.28 +0.5 419,800 - Dshi_0428 0.28 -1.2 419,814 + Dshi_0428 0.29 +2.1 419,841 + Dshi_0428 0.30 +0.1
Or see this region's nucleotide sequence