Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0339 and Dshi_0340 are separated by 117 nucleotides Dshi_0340 and Dshi_0341 are separated by 11 nucleotides Dshi_0341 and Dshi_0342 are separated by 260 nucleotides Dshi_0342 and Dshi_0343 are separated by 90 nucleotides
Dshi_0339: Dshi_0339 - protein of unknown function DUF849 (RefSeq), at 327,660 to 328,538
_0339
Dshi_0340: Dshi_0340 - ribosomal protein L31 (RefSeq), at 328,656 to 328,877
_0340
Dshi_0341: Dshi_0341 - ribosomal protein L19 (RefSeq), at 328,889 to 329,263
_0341
Dshi_0342: Dshi_0342 - tRNA (guanine-N1)-methyltransferase (RefSeq), at 329,524 to 330,321
_0342
Dshi_0343: Dshi_0343 - aminoglycoside phosphotransferase (RefSeq), at 330,412 to 331,401
_0343
Position (kb) 329
330
331 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 328.636 kb on - strand at 329.530 kb on - strand at 330.227 kb on + strand, within Dshi_0342 at 330.437 kb on + strand at 330.526 kb on - strand, within Dshi_0343 at 330.537 kb on + strand, within Dshi_0343 at 330.577 kb on + strand, within Dshi_0343 at 330.609 kb on + strand, within Dshi_0343 at 330.728 kb on - strand, within Dshi_0343 at 330.743 kb on - strand, within Dshi_0343 at 330.764 kb on + strand, within Dshi_0343 at 330.808 kb on + strand, within Dshi_0343 at 330.871 kb on + strand, within Dshi_0343 at 331.104 kb on + strand, within Dshi_0343 at 331.104 kb on + strand, within Dshi_0343 at 331.104 kb on + strand, within Dshi_0343 at 331.112 kb on - strand, within Dshi_0343 at 331.211 kb on - strand, within Dshi_0343 at 331.294 kb on + strand, within Dshi_0343 at 331.294 kb on + strand, within Dshi_0343 at 331.302 kb on - strand, within Dshi_0343
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 328,636 - +2.3 329,530 - -0.9 330,227 + Dshi_0342 0.88 +0.7 330,437 + -1.6 330,526 - Dshi_0343 0.12 -1.3 330,537 + Dshi_0343 0.13 +0.7 330,577 + Dshi_0343 0.17 +0.7 330,609 + Dshi_0343 0.20 +0.7 330,728 - Dshi_0343 0.32 +0.7 330,743 - Dshi_0343 0.33 -3.1 330,764 + Dshi_0343 0.36 -0.6 330,808 + Dshi_0343 0.40 +0.7 330,871 + Dshi_0343 0.46 +0.8 331,104 + Dshi_0343 0.70 +0.1 331,104 + Dshi_0343 0.70 -0.3 331,104 + Dshi_0343 0.70 -1.9 331,112 - Dshi_0343 0.71 -1.3 331,211 - Dshi_0343 0.81 -2.6 331,294 + Dshi_0343 0.89 -0.3 331,294 + Dshi_0343 0.89 +1.1 331,302 - Dshi_0343 0.90 -0.3
Or see this region's nucleotide sequence