Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0315 and Dshi_0316 overlap by 4 nucleotides Dshi_0316 and Dshi_0317 overlap by 4 nucleotides
Dshi_0315: Dshi_0315 - pseudouridine synthase, RluA family (RefSeq), at 303,518 to 304,564
_0315
Dshi_0316: Dshi_0316 - HAD-superfamily hydrolase, subfamily IA, variant 3 (RefSeq), at 304,561 to 305,241
_0316
Dshi_0317: Dshi_0317 - ATP12 ATPase (RefSeq), at 305,238 to 305,942
_0317
Position (kb) 304
305
306 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4
5 at 303.672 kb on - strand, within Dshi_0315 at 303.837 kb on - strand, within Dshi_0315 at 303.981 kb on - strand, within Dshi_0315 at 304.212 kb on - strand, within Dshi_0315 at 304.500 kb on + strand at 304.508 kb on - strand at 304.513 kb on + strand at 304.676 kb on - strand, within Dshi_0316 at 304.712 kb on - strand, within Dshi_0316 at 304.814 kb on + strand, within Dshi_0316 at 304.898 kb on - strand, within Dshi_0316 at 304.921 kb on + strand, within Dshi_0316 at 305.017 kb on - strand, within Dshi_0316 at 305.025 kb on + strand, within Dshi_0316 at 305.033 kb on - strand, within Dshi_0316 at 305.033 kb on - strand, within Dshi_0316 at 305.111 kb on + strand, within Dshi_0316 at 305.149 kb on - strand, within Dshi_0316 at 305.150 kb on + strand, within Dshi_0316 at 305.176 kb on + strand at 305.936 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.948 kb on + strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 305.956 kb on - strand at 306.024 kb on - strand at 306.034 kb on - strand at 306.046 kb on - strand at 306.075 kb on + strand at 306.075 kb on + strand at 306.123 kb on + strand at 306.140 kb on - strand at 306.152 kb on - strand at 306.200 kb on + strand at 306.200 kb on + strand at 306.200 kb on + strand at 306.200 kb on + strand at 306.200 kb on + strand at 306.208 kb on - strand at 306.208 kb on - strand at 306.208 kb on - strand at 306.208 kb on - strand at 306.208 kb on - strand at 306.217 kb on - strand at 306.220 kb on - strand at 306.221 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 303,672 - Dshi_0315 0.15 -1.4 303,837 - Dshi_0315 0.30 -0.2 303,981 - Dshi_0315 0.44 +0.8 304,212 - Dshi_0315 0.66 +0.8 304,500 + -0.4 304,508 - -1.9 304,513 + +1.0 304,676 - Dshi_0316 0.17 -1.2 304,712 - Dshi_0316 0.22 +2.0 304,814 + Dshi_0316 0.37 +3.1 304,898 - Dshi_0316 0.49 +0.3 304,921 + Dshi_0316 0.53 -1.2 305,017 - Dshi_0316 0.67 -0.2 305,025 + Dshi_0316 0.68 +2.1 305,033 - Dshi_0316 0.69 -0.5 305,033 - Dshi_0316 0.69 -2.0 305,111 + Dshi_0316 0.81 +4.8 305,149 - Dshi_0316 0.86 +0.6 305,150 + Dshi_0316 0.86 -1.2 305,176 + -0.2 305,936 + -0.7 305,948 + +0.2 305,948 + +1.7 305,948 + +0.4 305,948 + +2.7 305,948 + +4.1 305,948 + +1.8 305,948 + +1.6 305,948 + +0.4 305,948 + -0.6 305,948 + -1.2 305,948 + +1.8 305,948 + +1.2 305,948 + +0.8 305,948 + +1.2 305,948 + -1.8 305,948 + +0.6 305,948 + +2.2 305,948 + -1.1 305,948 + +0.3 305,948 + +1.1 305,948 + +1.1 305,948 + +0.9 305,948 + +0.8 305,948 + +0.4 305,948 + +0.2 305,948 + +0.5 305,956 - +3.6 305,956 - -0.9 305,956 - -0.4 305,956 - -0.9 305,956 - +0.6 305,956 - -0.5 305,956 - +0.8 305,956 - +2.2 305,956 - -1.2 305,956 - +3.4 305,956 - +1.3 305,956 - -0.2 305,956 - -0.1 305,956 - -0.3 305,956 - -2.2 305,956 - -2.2 305,956 - +0.8 305,956 - +0.8 305,956 - +0.8 305,956 - +0.6 306,024 - -0.0 306,034 - +1.1 306,046 - -1.7 306,075 + +1.0 306,075 + +3.4 306,123 + -2.5 306,140 - -0.5 306,152 - -0.4 306,200 + -2.5 306,200 + +2.0 306,200 + +2.2 306,200 + -0.5 306,200 + +3.1 306,208 - +0.8 306,208 - +1.8 306,208 - -1.0 306,208 - +2.1 306,208 - +2.8 306,217 - +0.5 306,220 - +1.2 306,221 + +1.8
Or see this region's nucleotide sequence