Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0289 and Dshi_0290 are separated by 150 nucleotides Dshi_0290 and Dshi_0291 are separated by 572 nucleotides Dshi_0291 and Dshi_0292 are separated by 51 nucleotides Dshi_0292 and Dshi_0293 are separated by 87 nucleotides
Dshi_0289: Dshi_0289 - ribosomal protein L16 (RefSeq), at 287,653 to 288,066
_0289
Dshi_0290: Dshi_0290 - hypothetical protein (RefSeq), at 288,217 to 288,447
_0290
Dshi_0291: Dshi_0291 - hypothetical protein (RefSeq), at 289,020 to 289,409
_0291
Dshi_0292: Dshi_0292 - hypothetical protein (RefSeq), at 289,461 to 290,186
_0292
Dshi_0293: Dshi_0293 - ribosomal protein L29 (RefSeq), at 290,274 to 290,480
_0293
Position (kb) 289
290 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 288.193 kb on + strand at 288.203 kb on - strand at 288.290 kb on + strand, within Dshi_0290 at 288.290 kb on + strand, within Dshi_0290 at 288.298 kb on + strand, within Dshi_0290 at 288.298 kb on + strand, within Dshi_0290 at 288.299 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.305 kb on + strand, within Dshi_0290 at 288.308 kb on - strand, within Dshi_0290 at 288.308 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.313 kb on - strand, within Dshi_0290 at 288.361 kb on - strand, within Dshi_0290 at 288.401 kb on + strand, within Dshi_0290 at 288.405 kb on - strand, within Dshi_0290 at 288.431 kb on - strand at 288.449 kb on + strand at 288.454 kb on + strand at 288.471 kb on - strand at 288.475 kb on + strand at 288.475 kb on + strand at 288.520 kb on - strand at 288.522 kb on + strand at 288.527 kb on + strand at 288.529 kb on + strand at 288.529 kb on - strand at 288.536 kb on + strand at 288.542 kb on + strand at 288.542 kb on + strand at 288.548 kb on + strand at 288.561 kb on - strand at 288.569 kb on + strand at 288.582 kb on + strand at 288.582 kb on + strand at 288.590 kb on - strand at 288.590 kb on - strand at 288.607 kb on - strand at 288.631 kb on + strand at 288.631 kb on + strand at 288.631 kb on + strand at 288.646 kb on + strand at 288.646 kb on + strand at 288.646 kb on + strand at 288.657 kb on + strand at 288.661 kb on + strand at 288.662 kb on - strand at 288.665 kb on - strand at 288.665 kb on - strand at 288.668 kb on + strand at 288.668 kb on + strand at 288.673 kb on + strand at 288.676 kb on - strand at 288.676 kb on - strand at 288.676 kb on - strand at 288.676 kb on - strand at 288.725 kb on + strand at 288.725 kb on + strand at 288.725 kb on + strand at 288.725 kb on + strand at 288.733 kb on - strand at 288.733 kb on - strand at 288.794 kb on - strand at 288.818 kb on + strand at 288.818 kb on + strand at 288.818 kb on + strand at 288.823 kb on + strand at 288.826 kb on - strand at 288.826 kb on - strand at 288.826 kb on - strand at 288.826 kb on - strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.828 kb on + strand at 288.833 kb on + strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.836 kb on - strand at 288.837 kb on + strand at 288.838 kb on + strand at 288.838 kb on + strand at 288.846 kb on - strand at 288.846 kb on - strand at 288.846 kb on - strand at 288.851 kb on - strand at 288.862 kb on + strand at 288.870 kb on + strand at 288.870 kb on + strand at 288.870 kb on - strand at 288.870 kb on - strand at 288.877 kb on - strand at 288.909 kb on + strand at 288.909 kb on + strand at 288.915 kb on - strand at 288.950 kb on + strand at 289.000 kb on - strand at 289.001 kb on - strand at 289.003 kb on + strand at 289.003 kb on + strand at 289.003 kb on + strand at 289.003 kb on + strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.011 kb on - strand at 289.015 kb on + strand at 289.017 kb on + strand at 289.017 kb on + strand at 289.023 kb on - strand at 289.025 kb on - strand at 289.057 kb on + strand at 289.071 kb on + strand, within Dshi_0291 at 289.071 kb on + strand, within Dshi_0291 at 289.074 kb on - strand, within Dshi_0291 at 289.079 kb on + strand, within Dshi_0291 at 289.079 kb on + strand, within Dshi_0291 at 289.087 kb on + strand, within Dshi_0291 at 289.095 kb on - strand, within Dshi_0291 at 289.095 kb on - strand, within Dshi_0291 at 289.137 kb on + strand, within Dshi_0291 at 289.140 kb on - strand, within Dshi_0291 at 289.140 kb on - strand, within Dshi_0291 at 289.145 kb on - strand, within Dshi_0291 at 289.166 kb on + strand, within Dshi_0291 at 289.169 kb on - strand, within Dshi_0291 at 289.176 kb on + strand, within Dshi_0291 at 289.179 kb on - strand, within Dshi_0291 at 289.196 kb on + strand, within Dshi_0291 at 289.204 kb on - strand, within Dshi_0291 at 289.216 kb on - strand, within Dshi_0291 at 289.295 kb on - strand, within Dshi_0291 at 289.335 kb on - strand, within Dshi_0291 at 289.379 kb on - strand at 289.394 kb on + strand at 289.438 kb on + strand at 289.471 kb on - strand at 289.523 kb on + strand at 289.548 kb on - strand, within Dshi_0292 at 289.580 kb on + strand, within Dshi_0292 at 289.580 kb on + strand, within Dshi_0292 at 289.609 kb on + strand, within Dshi_0292 at 289.645 kb on + strand, within Dshi_0292 at 289.653 kb on - strand, within Dshi_0292 at 289.687 kb on - strand, within Dshi_0292 at 289.700 kb on - strand, within Dshi_0292 at 289.890 kb on - strand, within Dshi_0292 at 289.895 kb on - strand, within Dshi_0292 at 289.937 kb on + strand, within Dshi_0292 at 289.942 kb on + strand, within Dshi_0292 at 290.006 kb on + strand, within Dshi_0292 at 290.006 kb on + strand, within Dshi_0292 at 290.006 kb on + strand, within Dshi_0292 at 290.018 kb on + strand, within Dshi_0292 at 290.041 kb on + strand, within Dshi_0292 at 290.041 kb on + strand, within Dshi_0292 at 290.041 kb on + strand, within Dshi_0292
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 288,193 + -0.0 288,203 - +0.4 288,290 + Dshi_0290 0.32 +1.3 288,290 + Dshi_0290 0.32 -4.4 288,298 + Dshi_0290 0.35 +3.0 288,298 + Dshi_0290 0.35 -0.8 288,299 + Dshi_0290 0.35 +4.8 288,305 + Dshi_0290 0.38 +0.7 288,305 + Dshi_0290 0.38 +1.0 288,305 + Dshi_0290 0.38 +1.1 288,305 + Dshi_0290 0.38 -0.7 288,305 + Dshi_0290 0.38 +5.1 288,305 + Dshi_0290 0.38 +0.4 288,305 + Dshi_0290 0.38 -3.4 288,308 - Dshi_0290 0.39 +0.6 288,308 - Dshi_0290 0.39 +0.4 288,313 - Dshi_0290 0.42 -1.6 288,313 - Dshi_0290 0.42 -0.4 288,313 - Dshi_0290 0.42 -0.8 288,313 - Dshi_0290 0.42 +0.5 288,313 - Dshi_0290 0.42 -0.1 288,361 - Dshi_0290 0.62 -1.2 288,401 + Dshi_0290 0.80 -0.0 288,405 - Dshi_0290 0.81 -2.2 288,431 - -0.5 288,449 + -1.2 288,454 + +0.4 288,471 - -1.5 288,475 + -1.7 288,475 + +0.6 288,520 - +0.3 288,522 + -0.8 288,527 + -1.9 288,529 + +1.2 288,529 - -0.2 288,536 + +0.4 288,542 + -1.5 288,542 + +0.4 288,548 + +0.1 288,561 - +2.1 288,569 + +0.8 288,582 + +1.6 288,582 + +0.4 288,590 - -1.2 288,590 - -3.6 288,607 - +0.6 288,631 + -0.5 288,631 + -1.1 288,631 + +0.2 288,646 + -2.2 288,646 + +0.3 288,646 + -1.1 288,657 + -1.4 288,661 + -0.3 288,662 - -0.0 288,665 - -1.4 288,665 - -0.4 288,668 + +1.0 288,668 + +1.1 288,673 + +0.0 288,676 - -1.2 288,676 - -0.8 288,676 - +0.5 288,676 - +0.5 288,725 + +0.5 288,725 + -1.0 288,725 + +1.7 288,725 + +1.9 288,733 - -2.4 288,733 - +0.2 288,794 - +1.1 288,818 + +1.1 288,818 + +2.0 288,818 + +1.5 288,823 + -1.2 288,826 - -0.1 288,826 - -2.4 288,826 - +0.7 288,826 - -0.0 288,828 + +0.7 288,828 + -1.1 288,828 + -1.4 288,828 + +1.3 288,828 + +0.8 288,828 + -0.8 288,828 + +0.6 288,833 + -0.2 288,836 - -1.3 288,836 - -0.6 288,836 - -3.5 288,836 - +0.2 288,836 - +2.3 288,837 + -3.5 288,838 + -0.2 288,838 + +0.4 288,846 - +0.0 288,846 - +0.5 288,846 - -2.1 288,851 - -2.0 288,862 + -0.8 288,870 + +0.6 288,870 + +1.2 288,870 - -3.7 288,870 - -0.1 288,877 - +1.1 288,909 + +2.5 288,909 + +0.8 288,915 - +1.8 288,950 + +2.8 289,000 - -3.1 289,001 - +1.1 289,003 + -0.1 289,003 + +0.4 289,003 + -0.7 289,003 + +2.5 289,011 - -0.9 289,011 - -0.3 289,011 - +0.2 289,011 - +2.4 289,011 - +0.2 289,015 + +0.7 289,017 + +0.9 289,017 + -0.0 289,023 - -2.1 289,025 - -1.2 289,057 + +1.2 289,071 + Dshi_0291 0.13 -2.2 289,071 + Dshi_0291 0.13 +4.9 289,074 - Dshi_0291 0.14 -2.4 289,079 + Dshi_0291 0.15 +0.1 289,079 + Dshi_0291 0.15 +0.8 289,087 + Dshi_0291 0.17 +0.3 289,095 - Dshi_0291 0.19 -1.8 289,095 - Dshi_0291 0.19 -0.4 289,137 + Dshi_0291 0.30 +0.2 289,140 - Dshi_0291 0.31 +1.0 289,140 - Dshi_0291 0.31 -0.3 289,145 - Dshi_0291 0.32 +2.6 289,166 + Dshi_0291 0.37 -0.3 289,169 - Dshi_0291 0.38 +0.0 289,176 + Dshi_0291 0.40 -0.6 289,179 - Dshi_0291 0.41 +0.6 289,196 + Dshi_0291 0.45 +0.5 289,204 - Dshi_0291 0.47 +0.9 289,216 - Dshi_0291 0.50 +2.0 289,295 - Dshi_0291 0.71 -1.2 289,335 - Dshi_0291 0.81 +0.1 289,379 - +0.2 289,394 + +1.3 289,438 + +0.8 289,471 - +1.7 289,523 + -1.8 289,548 - Dshi_0292 0.12 +0.1 289,580 + Dshi_0292 0.16 +0.5 289,580 + Dshi_0292 0.16 +0.1 289,609 + Dshi_0292 0.20 +0.4 289,645 + Dshi_0292 0.25 -3.2 289,653 - Dshi_0292 0.26 +0.9 289,687 - Dshi_0292 0.31 +0.3 289,700 - Dshi_0292 0.33 -1.2 289,890 - Dshi_0292 0.59 -0.0 289,895 - Dshi_0292 0.60 -2.2 289,937 + Dshi_0292 0.66 +1.4 289,942 + Dshi_0292 0.66 -0.4 290,006 + Dshi_0292 0.75 -0.5 290,006 + Dshi_0292 0.75 +0.6 290,006 + Dshi_0292 0.75 +0.4 290,018 + Dshi_0292 0.77 +0.4 290,041 + Dshi_0292 0.80 -0.3 290,041 + Dshi_0292 0.80 -1.2 290,041 + Dshi_0292 0.80 +0.6
Or see this region's nucleotide sequence