Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0237 and Dshi_0238 are separated by 286 nucleotides Dshi_0238 and Dshi_0239 are separated by 4 nucleotides Dshi_0239 and Dshi_0240 overlap by 4 nucleotides
Dshi_0237: Dshi_0237 - phenylalanyl-tRNA synthetase, beta subunit (RefSeq), at 234,571 to 236,967
_0237
Dshi_0238: Dshi_0238 - hypothetical protein (RefSeq), at 237,254 to 237,724
_0238
Dshi_0239: Dshi_0239 - Aspartate dehydrogenase (RefSeq), at 237,729 to 238,490
_0239
Dshi_0240: Dshi_0240 - Glutathione S-transferase domain (RefSeq), at 238,487 to 239,185
_0240
Position (kb) 237
238 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 237.017 kb on - strand at 237.197 kb on + strand at 237.257 kb on + strand at 237.257 kb on + strand at 237.334 kb on - strand, within Dshi_0238 at 237.442 kb on + strand, within Dshi_0238 at 237.614 kb on - strand, within Dshi_0238 at 237.702 kb on - strand at 237.753 kb on + strand at 237.806 kb on + strand, within Dshi_0239 at 237.996 kb on - strand, within Dshi_0239 at 238.150 kb on - strand, within Dshi_0239 at 238.379 kb on + strand, within Dshi_0239 at 238.388 kb on + strand, within Dshi_0239 at 238.425 kb on - strand at 238.481 kb on - strand at 238.566 kb on - strand, within Dshi_0240 at 238.622 kb on + strand, within Dshi_0240 at 238.704 kb on + strand, within Dshi_0240
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 237,017 - -2.0 237,197 + -0.4 237,257 + +0.8 237,257 + -3.0 237,334 - Dshi_0238 0.17 +0.8 237,442 + Dshi_0238 0.40 +4.9 237,614 - Dshi_0238 0.76 +3.8 237,702 - -2.3 237,753 + +1.5 237,806 + Dshi_0239 0.10 +0.8 237,996 - Dshi_0239 0.35 +0.8 238,150 - Dshi_0239 0.55 +0.2 238,379 + Dshi_0239 0.85 -1.1 238,388 + Dshi_0239 0.86 -1.6 238,425 - +2.8 238,481 - +1.8 238,566 - Dshi_0240 0.11 +0.8 238,622 + Dshi_0240 0.19 -0.1 238,704 + Dshi_0240 0.31 -0.6
Or see this region's nucleotide sequence