Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0115
Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
113,843 | - | +0.8 | |||
113,885 | - | +0.6 | |||
113,995 | + | Dshi_0115 | 0.30 | -4.2 | |
114,049 | + | Dshi_0115 | 0.39 | -1.3 | |
114,102 | - | Dshi_0115 | 0.49 | -1.6 | |
114,135 | - | Dshi_0115 | 0.55 | +0.7 | |
114,210 | + | Dshi_0115 | 0.68 | +2.5 | |
114,252 | + | Dshi_0115 | 0.76 | +2.5 | |
114,470 | - | -0.2 | |||
114,544 | + | -1.4 | |||
114,572 | + | -3.1 | |||
114,604 | + | +0.2 | |||
114,713 | - | -0.4 | |||
114,741 | - | -0.0 | |||
114,797 | - | Dshi_0116 | 0.11 | +0.5 | |
114,870 | + | Dshi_0116 | 0.18 | +1.9 | |
115,080 | - | Dshi_0116 | 0.38 | -0.9 | |
115,164 | - | Dshi_0116 | 0.46 | -1.6 | |
115,223 | + | Dshi_0116 | 0.52 | -1.3 | |
115,250 | - | Dshi_0116 | 0.54 | -1.1 | |
115,288 | - | Dshi_0116 | 0.58 | +0.6 | |
115,356 | - | Dshi_0116 | 0.64 | +0.9 | |
115,372 | - | Dshi_0116 | 0.66 | -2.5 |
Or see this region's nucleotide sequence