Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0102 and Dshi_0103 are separated by 105 nucleotides Dshi_0103 and Dshi_0104 overlap by 4 nucleotides Dshi_0104 and Dshi_0105 are separated by 11 nucleotides
Dshi_0102: Dshi_0102 - DNA polymerase III, alpha subunit (RefSeq), at 99,840 to 102,824
_0102
Dshi_0103: Dshi_0103 - Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (RefSeq), at 102,930 to 104,042
_0103
Dshi_0104: Dshi_0104 - GCN5-related N-acetyltransferase (RefSeq), at 104,039 to 104,527
_0104
Dshi_0105: Dshi_0105 - protein of unknown function DUF88 (RefSeq), at 104,539 to 105,249
_0105
Position (kb)
102
103
104
105 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 101.942 kb on + strand, within Dshi_0102 at 101.942 kb on + strand, within Dshi_0102 at 101.973 kb on - strand, within Dshi_0102 at 101.977 kb on + strand, within Dshi_0102 at 102.028 kb on - strand, within Dshi_0102 at 102.034 kb on - strand, within Dshi_0102 at 102.043 kb on + strand, within Dshi_0102 at 102.080 kb on + strand, within Dshi_0102 at 102.088 kb on - strand, within Dshi_0102 at 102.088 kb on - strand, within Dshi_0102 at 102.149 kb on - strand, within Dshi_0102 at 102.273 kb on + strand, within Dshi_0102 at 102.307 kb on + strand, within Dshi_0102 at 102.318 kb on - strand, within Dshi_0102 at 102.339 kb on + strand, within Dshi_0102 at 102.347 kb on + strand, within Dshi_0102 at 102.417 kb on + strand, within Dshi_0102 at 102.418 kb on - strand, within Dshi_0102 at 102.453 kb on + strand, within Dshi_0102 at 102.459 kb on + strand, within Dshi_0102 at 102.468 kb on + strand, within Dshi_0102 at 102.612 kb on - strand at 102.612 kb on - strand at 102.623 kb on - strand at 102.733 kb on - strand at 102.739 kb on + strand at 102.792 kb on + strand at 102.841 kb on + strand at 102.849 kb on - strand at 102.849 kb on - strand at 102.922 kb on + strand at 102.929 kb on - strand at 102.945 kb on + strand at 103.000 kb on + strand at 103.000 kb on + strand at 103.008 kb on - strand at 103.015 kb on - strand at 103.028 kb on + strand at 103.036 kb on - strand at 103.080 kb on + strand, within Dshi_0103 at 103.091 kb on + strand, within Dshi_0103 at 103.152 kb on - strand, within Dshi_0103 at 103.240 kb on + strand, within Dshi_0103 at 103.248 kb on - strand, within Dshi_0103 at 103.264 kb on + strand, within Dshi_0103 at 103.362 kb on - strand, within Dshi_0103 at 103.395 kb on + strand, within Dshi_0103 at 103.454 kb on + strand, within Dshi_0103 at 103.530 kb on - strand, within Dshi_0103 at 103.584 kb on + strand, within Dshi_0103 at 103.592 kb on - strand, within Dshi_0103 at 103.652 kb on + strand, within Dshi_0103 at 103.665 kb on + strand, within Dshi_0103 at 103.696 kb on - strand, within Dshi_0103 at 103.711 kb on + strand, within Dshi_0103 at 103.744 kb on - strand, within Dshi_0103 at 103.772 kb on - strand, within Dshi_0103 at 103.918 kb on + strand, within Dshi_0103 at 103.979 kb on + strand at 103.987 kb on - strand at 104.044 kb on - strand at 104.060 kb on + strand at 104.060 kb on + strand at 104.068 kb on - strand at 104.092 kb on - strand, within Dshi_0104 at 104.092 kb on - strand, within Dshi_0104 at 104.132 kb on - strand, within Dshi_0104 at 104.194 kb on + strand, within Dshi_0104 at 104.194 kb on - strand, within Dshi_0104 at 104.202 kb on - strand, within Dshi_0104 at 104.229 kb on + strand, within Dshi_0104 at 104.272 kb on - strand, within Dshi_0104 at 104.308 kb on + strand, within Dshi_0104 at 104.308 kb on + strand, within Dshi_0104 at 104.308 kb on + strand, within Dshi_0104 at 104.310 kb on + strand, within Dshi_0104 at 104.388 kb on + strand, within Dshi_0104 at 104.489 kb on - strand at 104.647 kb on + strand, within Dshi_0105 at 104.666 kb on - strand, within Dshi_0105 at 104.666 kb on - strand, within Dshi_0105 at 104.694 kb on - strand, within Dshi_0105 at 104.731 kb on + strand, within Dshi_0105 at 104.830 kb on + strand, within Dshi_0105 at 104.867 kb on + strand, within Dshi_0105 at 104.960 kb on - strand, within Dshi_0105 at 105.007 kb on - strand, within Dshi_0105 at 105.007 kb on - strand, within Dshi_0105 at 105.007 kb on - strand, within Dshi_0105
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 101,942 + Dshi_0102 0.70 -0.9 101,942 + Dshi_0102 0.70 +1.9 101,973 - Dshi_0102 0.71 +0.0 101,977 + Dshi_0102 0.72 -2.4 102,028 - Dshi_0102 0.73 +0.9 102,034 - Dshi_0102 0.74 -0.5 102,043 + Dshi_0102 0.74 +2.3 102,080 + Dshi_0102 0.75 -1.4 102,088 - Dshi_0102 0.75 +2.9 102,088 - Dshi_0102 0.75 +1.9 102,149 - Dshi_0102 0.77 +4.0 102,273 + Dshi_0102 0.82 +0.9 102,307 + Dshi_0102 0.83 -0.7 102,318 - Dshi_0102 0.83 -0.1 102,339 + Dshi_0102 0.84 +0.9 102,347 + Dshi_0102 0.84 +1.2 102,417 + Dshi_0102 0.86 -0.2 102,418 - Dshi_0102 0.86 -1.5 102,453 + Dshi_0102 0.88 +0.7 102,459 + Dshi_0102 0.88 -0.3 102,468 + Dshi_0102 0.88 +0.8 102,612 - +2.5 102,612 - +0.6 102,623 - -1.1 102,733 - -1.1 102,739 + +1.4 102,792 + -2.3 102,841 + -1.7 102,849 - +1.3 102,849 - +1.2 102,922 + +1.1 102,929 - -0.1 102,945 + +0.0 103,000 + +2.5 103,000 + +0.5 103,008 - +2.3 103,015 - -1.8 103,028 + +2.9 103,036 - -1.5 103,080 + Dshi_0103 0.13 +0.9 103,091 + Dshi_0103 0.14 +1.0 103,152 - Dshi_0103 0.20 -0.7 103,240 + Dshi_0103 0.28 +0.8 103,248 - Dshi_0103 0.29 -1.4 103,264 + Dshi_0103 0.30 +0.8 103,362 - Dshi_0103 0.39 +2.5 103,395 + Dshi_0103 0.42 +1.0 103,454 + Dshi_0103 0.47 +0.1 103,530 - Dshi_0103 0.54 -1.2 103,584 + Dshi_0103 0.59 +0.3 103,592 - Dshi_0103 0.59 +0.6 103,652 + Dshi_0103 0.65 -2.3 103,665 + Dshi_0103 0.66 -0.1 103,696 - Dshi_0103 0.69 +0.3 103,711 + Dshi_0103 0.70 -0.2 103,744 - Dshi_0103 0.73 -1.1 103,772 - Dshi_0103 0.76 +0.6 103,918 + Dshi_0103 0.89 +0.1 103,979 + -2.1 103,987 - -2.8 104,044 - +1.5 104,060 + -0.6 104,060 + +0.5 104,068 - -0.2 104,092 - Dshi_0104 0.11 +0.2 104,092 - Dshi_0104 0.11 -0.3 104,132 - Dshi_0104 0.19 -1.1 104,194 + Dshi_0104 0.32 -1.8 104,194 - Dshi_0104 0.32 +1.2 104,202 - Dshi_0104 0.33 +3.2 104,229 + Dshi_0104 0.39 +1.1 104,272 - Dshi_0104 0.48 +0.2 104,308 + Dshi_0104 0.55 -0.6 104,308 + Dshi_0104 0.55 -0.1 104,308 + Dshi_0104 0.55 -3.4 104,310 + Dshi_0104 0.55 -1.9 104,388 + Dshi_0104 0.71 -0.3 104,489 - +0.7 104,647 + Dshi_0105 0.15 +0.2 104,666 - Dshi_0105 0.18 +3.7 104,666 - Dshi_0105 0.18 +1.0 104,694 - Dshi_0105 0.22 -0.7 104,731 + Dshi_0105 0.27 -0.6 104,830 + Dshi_0105 0.41 +1.3 104,867 + Dshi_0105 0.46 -0.3 104,960 - Dshi_0105 0.59 +0.8 105,007 - Dshi_0105 0.66 +2.3 105,007 - Dshi_0105 0.66 -1.4 105,007 - Dshi_0105 0.66 +1.0
Or see this region's nucleotide sequence