Experiment: m.b. Thallium(I) acetate 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0012 and Dshi_0013 overlap by 4 nucleotides Dshi_0013 and Dshi_0014 overlap by 1 nucleotides Dshi_0014 and Dshi_0015 are separated by 200 nucleotides
Dshi_0012: Dshi_0012 - succinyl-diaminopimelate desuccinylase (RefSeq), at 13,129 to 14,268
_0012
Dshi_0013: Dshi_0013 - GCN5-related N-acetyltransferase (RefSeq), at 14,265 to 14,693
_0013
Dshi_0014: Dshi_0014 - hypothetical protein (RefSeq), at 14,693 to 15,271
_0014
Dshi_0015: Dshi_0015 - ribonuclease R (RefSeq), at 15,472 to 17,727
_0015
Position (kb) 14
15
16 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 14.307 kb on - strand at 14.342 kb on + strand, within Dshi_0013 at 14.528 kb on - strand, within Dshi_0013 at 14.591 kb on + strand, within Dshi_0013 at 14.624 kb on - strand, within Dshi_0013 at 14.729 kb on + strand at 14.783 kb on + strand, within Dshi_0014 at 14.849 kb on - strand, within Dshi_0014 at 14.898 kb on - strand, within Dshi_0014 at 14.967 kb on + strand, within Dshi_0014 at 15.068 kb on + strand, within Dshi_0014 at 15.076 kb on - strand, within Dshi_0014 at 15.140 kb on + strand, within Dshi_0014 at 15.292 kb on - strand at 15.324 kb on + strand at 15.390 kb on + strand at 15.398 kb on - strand at 15.399 kb on - strand at 15.616 kb on + strand at 15.616 kb on + strand at 15.658 kb on + strand at 15.666 kb on - strand at 15.801 kb on + strand, within Dshi_0015 at 15.801 kb on + strand, within Dshi_0015 at 15.801 kb on + strand, within Dshi_0015 at 15.809 kb on - strand, within Dshi_0015 at 15.809 kb on - strand, within Dshi_0015 at 15.809 kb on - strand, within Dshi_0015 at 15.809 kb on - strand, within Dshi_0015 at 15.836 kb on + strand, within Dshi_0015 at 15.985 kb on + strand, within Dshi_0015 at 15.993 kb on - strand, within Dshi_0015 at 15.993 kb on - strand, within Dshi_0015 at 15.993 kb on - strand, within Dshi_0015 at 15.993 kb on - strand, within Dshi_0015 at 16.019 kb on - strand at 16.045 kb on + strand, within Dshi_0015 at 16.062 kb on - strand, within Dshi_0015 at 16.087 kb on + strand, within Dshi_0015 at 16.184 kb on - strand, within Dshi_0015 at 16.184 kb on - strand, within Dshi_0015 at 16.184 kb on - strand, within Dshi_0015 at 16.264 kb on - strand, within Dshi_0015
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.001 mg/ml remove 14,307 - -2.7 14,342 + Dshi_0013 0.18 -1.8 14,528 - Dshi_0013 0.61 -1.4 14,591 + Dshi_0013 0.76 +0.9 14,624 - Dshi_0013 0.84 -1.4 14,729 + -1.4 14,783 + Dshi_0014 0.16 -0.1 14,849 - Dshi_0014 0.27 +0.9 14,898 - Dshi_0014 0.35 +0.1 14,967 + Dshi_0014 0.47 -1.1 15,068 + Dshi_0014 0.65 -2.3 15,076 - Dshi_0014 0.66 +0.9 15,140 + Dshi_0014 0.77 +0.9 15,292 - +0.9 15,324 + -2.4 15,390 + -0.5 15,398 - -0.7 15,399 - -1.9 15,616 + -2.9 15,616 + +0.9 15,658 + +0.9 15,666 - +2.5 15,801 + Dshi_0015 0.15 -0.1 15,801 + Dshi_0015 0.15 -0.1 15,801 + Dshi_0015 0.15 +1.9 15,809 - Dshi_0015 0.15 +0.9 15,809 - Dshi_0015 0.15 -0.1 15,809 - Dshi_0015 0.15 -0.7 15,809 - Dshi_0015 0.15 -2.7 15,836 + Dshi_0015 0.16 +0.6 15,985 + Dshi_0015 0.23 +0.9 15,993 - Dshi_0015 0.23 -2.7 15,993 - Dshi_0015 0.23 +1.9 15,993 - Dshi_0015 0.23 -3.7 15,993 - Dshi_0015 0.23 +0.9 16,019 - +0.9 16,045 + Dshi_0015 0.25 -0.7 16,062 - Dshi_0015 0.26 -2.0 16,087 + Dshi_0015 0.27 -0.1 16,184 - Dshi_0015 0.32 +0.9 16,184 - Dshi_0015 0.32 +1.2 16,184 - Dshi_0015 0.32 -1.3 16,264 - Dshi_0015 0.35 -1.7
Or see this region's nucleotide sequence