Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g87

Experiment: acetate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate
83,231	+		HP15_p187g85	0.43	+0.0
83,241	-		HP15_p187g85	0.44	+0.9
83,273	-		HP15_p187g85	0.47	-1.8
83,276	+		HP15_p187g85	0.47	-0.8
83,291	+		HP15_p187g85	0.49	-1.4
83,307	+		HP15_p187g85	0.50	-0.6
83,319	+		HP15_p187g85	0.51	-1.1
83,325	-		HP15_p187g85	0.52	-0.9
83,327	-		HP15_p187g85	0.52	-0.4
83,327	-		HP15_p187g85	0.52	-0.5
83,334	+		HP15_p187g85	0.53	+0.8
83,334	+		HP15_p187g85	0.53	+0.6
83,334	+		HP15_p187g85	0.53	-0.4
83,334	+		HP15_p187g85	0.53	+0.9
83,334	+		HP15_p187g85	0.53	-0.8
83,337	-		HP15_p187g85	0.53	+0.2
83,339	+		HP15_p187g85	0.53	-0.1
83,342	-		HP15_p187g85	0.54	-0.4
83,342	-		HP15_p187g85	0.54	-0.7
83,342	-		HP15_p187g85	0.54	-0.3
83,349	+		HP15_p187g85	0.54	-0.4
83,355	-		HP15_p187g85	0.55	+1.0
83,356	-		HP15_p187g85	0.55	+1.6
83,373	+		HP15_p187g85	0.56	-1.7
83,373	+		HP15_p187g85	0.56	-0.6
83,373	+		HP15_p187g85	0.56	+1.1
83,373	-		HP15_p187g85	0.56	-0.3
83,381	-		HP15_p187g85	0.57	-0.0
83,384	+		HP15_p187g85	0.57	-0.3
83,392	-		HP15_p187g85	0.58	+0.2
83,392	-		HP15_p187g85	0.58	-0.2
83,404	-		HP15_p187g85	0.59	+0.6
83,434	+		HP15_p187g85	0.62	-0.6
83,446	+		HP15_p187g85	0.63	-0.2
83,474	-		HP15_p187g85	0.66	+0.1
83,513	+		HP15_p187g85	0.69	+0.5
83,513	+		HP15_p187g85	0.69	-0.3
83,545	+		HP15_p187g85	0.72	-1.3
83,674	+		HP15_p187g85	0.84	-0.7
83,682	-		HP15_p187g85	0.85	+1.1
83,682	-		HP15_p187g85	0.85	-0.4
83,747	+				+0.2
83,750	-				-0.2
83,755	-				+1.1
83,755	-				+1.0
83,822	+				-0.9
83,828	+				-0.8
83,870	-				-0.2
83,894	+				+1.1
83,901	+				-0.3
83,901	+				-0.3
83,906	+				-0.6
83,909	-				-0.7
83,909	-				-0.6
83,942	+				-1.3
83,980	+				+0.5
83,988	-				-0.8
84,064	+		HP15_p187g86	0.33	+1.3
84,100	-		HP15_p187g86	0.62	+1.2
84,119	+		HP15_p187g86	0.77	-0.6
84,119	+		HP15_p187g86	0.77	-0.3
84,119	+		HP15_p187g86	0.77	+0.1
84,119	+		HP15_p187g86	0.77	-0.9
84,121	+		HP15_p187g86	0.79	-1.0
84,124	+		HP15_p187g86	0.81	+0.5
84,126	+		HP15_p187g86	0.83	-1.2
84,126	+		HP15_p187g86	0.83	-0.2
84,126	+		HP15_p187g86	0.83	+0.8
84,127	-		HP15_p187g86	0.83	-0.6
84,127	-		HP15_p187g86	0.83	-0.1
84,127	-		HP15_p187g86	0.83	-0.8
84,127	-		HP15_p187g86	0.83	-1.6
84,127	-		HP15_p187g86	0.83	+0.8
84,134	-		HP15_p187g86	0.89	+1.0
84,145	+				-0.3
84,185	-				+0.7
84,221	+				-0.4
84,221	+				+0.4
84,227	+				-0.4
84,235	-				-0.6
84,235	-				+1.1
84,237	+				+0.5
84,246	+				-0.6
84,315	+		HP15_p187g87	0.13	-0.3
84,321	+		HP15_p187g87	0.13	-0.0
84,321	+		HP15_p187g87	0.13	-0.1
84,321	+		HP15_p187g87	0.13	-0.1
84,321	+		HP15_p187g87	0.13	-0.7
84,329	-		HP15_p187g87	0.14	-0.7
84,395	+		HP15_p187g87	0.19	-0.6
84,405	+		HP15_p187g87	0.20	-0.4
84,408	-		HP15_p187g87	0.20	+0.8
84,408	-		HP15_p187g87	0.20	+0.8
84,439	-		HP15_p187g87	0.23	-1.2
84,496	+		HP15_p187g87	0.27	+2.4
84,521	-		HP15_p187g87	0.29	-0.9
84,587	+		HP15_p187g87	0.34	-0.5
84,640	+		HP15_p187g87	0.39	+1.2
84,697	+		HP15_p187g87	0.43	-0.2
84,718	-		HP15_p187g87	0.45	-1.2
84,781	-		HP15_p187g87	0.50	+1.2
84,804	-		HP15_p187g87	0.52	-0.3
84,817	-		HP15_p187g87	0.53	+1.2
84,829	+		HP15_p187g87	0.54	-0.8
84,843	+		HP15_p187g87	0.55	-0.8
84,871	+		HP15_p187g87	0.57	-2.5
84,871	+		HP15_p187g87	0.57	+0.5
84,880	-		HP15_p187g87	0.58	-0.7
84,919	-		HP15_p187g87	0.61	-1.8
84,950	-		HP15_p187g87	0.63	+0.5
84,972	+		HP15_p187g87	0.65	-0.4
84,990	-		HP15_p187g87	0.66	-1.5
84,990	-		HP15_p187g87	0.66	-1.4
84,990	-		HP15_p187g87	0.66	-0.6
85,027	+		HP15_p187g87	0.69	-0.5
85,029	-		HP15_p187g87	0.69	-1.0
85,126	+		HP15_p187g87	0.77	-0.5
85,126	+		HP15_p187g87	0.77	-1.1
85,126	+		HP15_p187g87	0.77	+0.6
85,126	+		HP15_p187g87	0.77	-0.0
85,134	-		HP15_p187g87	0.78	+0.0
85,134	-		HP15_p187g87	0.78	+1.4
85,134	-		HP15_p187g87	0.78	-0.3
85,134	-		HP15_p187g87	0.78	+0.6
85,191	-		HP15_p187g87	0.82	-0.4
85,195	+		HP15_p187g87	0.83	-2.5
85,219	-		HP15_p187g87	0.85	-0.8
85,230	+		HP15_p187g87	0.85	+1.1
85,328	+				-0.1
85,336	-				-0.3
85,336	-				-0.4
85,339	+				+0.0
85,383	+				-0.4
85,417	-				+0.3
85,447	+				+1.0
85,465	-				-0.4
85,484	-				+0.8
85,608	+		HP15_p187g88	0.20	-0.1
85,618	-		HP15_p187g88	0.22	+0.9
85,618	-		HP15_p187g88	0.22	-1.4
85,642	-		HP15_p187g88	0.26	+0.8
85,649	+		HP15_p187g88	0.27	-1.1
85,649	+		HP15_p187g88	0.27	-2.7
85,657	-		HP15_p187g88	0.29	-0.0
85,657	-		HP15_p187g88	0.29	+0.5
85,657	-		HP15_p187g88	0.29	-2.6
85,669	+		HP15_p187g88	0.31	+1.2
85,674	+		HP15_p187g88	0.32	-0.8
85,674	+		HP15_p187g88	0.32	+0.6
85,677	-		HP15_p187g88	0.33	+1.0
85,684	+		HP15_p187g88	0.34	+0.0
85,687	-		HP15_p187g88	0.34	+1.4
85,701	+		HP15_p187g88	0.37	-0.1
85,706	+		HP15_p187g88	0.38	+0.2
85,731	+		HP15_p187g88	0.43	-0.2
85,774	+		HP15_p187g88	0.50	-0.9
85,791	-		HP15_p187g88	0.54	-0.9
85,793	-		HP15_p187g88	0.54	-1.4
85,803	-		HP15_p187g88	0.56	-0.6
85,860	+		HP15_p187g88	0.66	+1.0
85,874	-		HP15_p187g88	0.69	+0.6
85,896	-		HP15_p187g88	0.73	-0.0
85,896	-		HP15_p187g88	0.73	-0.8
85,965	+		HP15_p187g88	0.86	+0.2
86,063	+				-0.2
86,077	-				-0.2
86,106	-				+1.8
86,111	-				+0.7
86,195	-		HP15_p187g89	0.18	+0.7
86,215	-		HP15_p187g89	0.33	-0.2
86,243	-		HP15_p187g89	0.55	-0.8
86,253	-		HP15_p187g89	0.63	-0.9
86,308	+				+0.5
86,387	-				-0.3
86,387	-				+0.3
86,387	-				+0.1
86,387	-				-1.4