Strain Fitness in Shewanella amazonensis SB2B around Sama_2485

Experiment: D-Maltose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose
2,986,722	+		Sama_2484	0.76	+1.0
2,986,722	+		Sama_2484	0.76	+0.1
2,986,722	+		Sama_2484	0.76	+0.1
2,986,722	+		Sama_2484	0.76	+2.7
2,986,722	+		Sama_2484	0.76	+0.7
2,986,722	+		Sama_2484	0.76	-1.5
2,986,722	+		Sama_2484	0.76	+0.3
2,986,722	+		Sama_2484	0.76	+0.1
2,986,722	+		Sama_2484	0.76	-0.2
2,986,723	-		Sama_2484	0.76	+0.2
2,986,723	-		Sama_2484	0.76	-1.1
2,986,723	-		Sama_2484	0.76	+1.8
2,986,723	-		Sama_2484	0.76	-0.7
2,986,723	-		Sama_2484	0.76	-0.5
2,986,723	-		Sama_2484	0.76	+0.3
2,986,723	-		Sama_2484	0.76	+0.5
2,986,723	-		Sama_2484	0.76	-1.0
2,986,723	-		Sama_2484	0.76	-1.8
2,986,724	+		Sama_2484	0.76	-1.9
2,986,724	+		Sama_2484	0.76	-1.1
2,986,724	+		Sama_2484	0.76	+0.4
2,986,724	+		Sama_2484	0.76	+0.0
2,986,724	+		Sama_2484	0.76	+1.2
2,986,724	+		Sama_2484	0.76	+0.1
2,986,724	+		Sama_2484	0.76	+1.7
2,986,725	-		Sama_2484	0.76	+1.1
2,986,725	-		Sama_2484	0.76	-0.0
2,986,725	-		Sama_2484	0.76	-1.0
2,986,725	-		Sama_2484	0.76	+2.2
2,986,725	-		Sama_2484	0.76	+0.1
2,986,725	-		Sama_2484	0.76	-1.7
2,986,725	-		Sama_2484	0.76	+0.9
2,986,725	-		Sama_2484	0.76	-0.2
2,986,731	+		Sama_2484	0.76	-0.8
2,986,731	+		Sama_2484	0.76	+0.7
2,986,731	+		Sama_2484	0.76	-0.7
2,986,731	+		Sama_2484	0.76	-0.3
2,986,731	+		Sama_2484	0.76	-0.0
2,986,732	-		Sama_2484	0.76	-1.3
2,986,732	-		Sama_2484	0.76	-0.9
2,986,732	-		Sama_2484	0.76	-0.9
2,986,750	+		Sama_2484	0.77	-0.4
2,986,752	+		Sama_2484	0.77	+0.7
2,986,752	+		Sama_2484	0.77	-0.3
2,986,753	-		Sama_2484	0.78	+1.6
2,986,753	-		Sama_2484	0.78	-0.7
2,986,753	-		Sama_2484	0.78	-0.9
2,986,753	-		Sama_2484	0.78	+2.6
2,986,753	-		Sama_2484	0.78	+0.1
2,986,785	+		Sama_2484	0.79	+1.0
2,986,785	+		Sama_2484	0.79	+0.2
2,986,785	+		Sama_2484	0.79	+0.5
2,986,797	+		Sama_2484	0.80	-1.0
2,986,863	-		Sama_2484	0.83	+0.3
2,986,902	+		Sama_2484	0.85	+0.3
2,986,902	+		Sama_2484	0.85	-0.5
2,986,903	-		Sama_2484	0.86	-2.1
2,986,903	-		Sama_2484	0.86	-0.8
2,986,905	+		Sama_2484	0.86	+2.2
2,986,906	-		Sama_2484	0.86	+0.1
2,986,906	-		Sama_2484	0.86	+0.2
2,986,961	+		Sama_2484	0.89	+0.4
2,986,962	-		Sama_2484	0.89	-0.0
2,986,989	+				+0.4
2,986,989	+				+0.5
2,986,990	-				-0.2
2,987,000	+				-0.1
2,987,014	+				-0.6
2,987,014	+				+0.8
2,987,028	+				+0.3
2,987,075	+				-2.0
2,987,076	-				-0.6
2,987,080	+				-0.4
2,987,081	-				-1.3
2,987,081	-				-0.2
2,987,102	-				+0.0
2,987,113	+				-0.3
2,987,114	-				-1.1
2,987,172	+				-0.0
2,987,172	+				+1.7
2,987,259	+				-0.4
2,987,260	-				-0.0
2,987,260	-				+0.5
2,987,261	+				+1.3
2,987,261	+				-0.7
2,987,262	-				+1.4
2,987,262	-				+0.9
2,987,262	-				+0.5
2,987,262	-				+1.9
2,987,275	+				+0.0
2,987,275	+				-1.6
2,987,291	+				+1.5
2,987,292	-				+0.4
2,987,292	-				+1.5
2,987,292	-				-0.7
2,987,292	-				-0.4
2,987,295	+				+0.5
2,987,295	+				-0.9
2,987,295	+				+1.7
2,987,295	+				-1.3
2,987,296	-				-2.1
2,987,296	-				-2.0
2,987,296	-				+0.8
2,987,346	-				+0.1
2,987,407	-				-0.4
2,987,409	+				+1.5
2,987,409	+				+0.5
2,987,709	+				+1.0
2,987,761	+				-1.6
2,987,761	+				-3.0
2,987,761	+				-1.3
2,987,762	-				-0.4
2,987,762	-				-2.3
2,987,762	-				-0.4
2,987,762	-				-1.0
2,987,765	+				-1.6
2,987,765	+				-2.0
2,987,766	-				-1.3
2,987,766	-				-2.2
2,987,766	-				-1.7
2,987,766	-				-1.3
2,987,766	-				-0.6
2,987,766	-				-1.3
2,987,766	-				-1.4
2,987,766	-				-0.8
2,987,766	-				-0.3
2,987,766	-				-0.8
2,987,798	+				-1.8
2,987,799	-				-0.9
2,987,819	-		Sama_2485	0.12	-1.7
2,987,819	-		Sama_2485	0.12	-1.2
2,987,919	+		Sama_2485	0.22	-2.3
2,987,932	-		Sama_2485	0.24	-2.5
2,987,932	-		Sama_2485	0.24	-2.4
2,987,932	-		Sama_2485	0.24	-1.4
2,988,008	+		Sama_2485	0.32	-2.0
2,988,019	-		Sama_2485	0.33	-2.8
2,988,019	-		Sama_2485	0.33	+0.7
2,988,019	-		Sama_2485	0.33	-0.9
2,988,045	-		Sama_2485	0.36	-2.6
2,988,045	-		Sama_2485	0.36	-1.9
2,988,045	-		Sama_2485	0.36	-1.8
2,988,045	-		Sama_2485	0.36	-1.3
2,988,073	-		Sama_2485	0.39	-0.9
2,988,073	-		Sama_2485	0.39	-1.8
2,988,073	-		Sama_2485	0.39	-0.5
2,988,085	+		Sama_2485	0.40	-2.5
2,988,085	+		Sama_2485	0.40	-0.6
2,988,086	-		Sama_2485	0.40	-1.2
2,988,086	-		Sama_2485	0.40	-1.1
2,988,086	-		Sama_2485	0.40	-2.1
2,988,135	+		Sama_2485	0.45	-0.1
2,988,136	-		Sama_2485	0.45	-1.0
2,988,173	+		Sama_2485	0.49	-2.0
2,988,190	+		Sama_2485	0.51	-0.5
2,988,190	+		Sama_2485	0.51	-0.8
2,988,190	+		Sama_2485	0.51	-2.5
2,988,191	-		Sama_2485	0.51	-0.4
2,988,325	+		Sama_2485	0.65	-1.5
2,988,325	+		Sama_2485	0.65	-2.1
2,988,325	+		Sama_2485	0.65	-0.5
2,988,326	-		Sama_2485	0.66	-0.8
2,988,355	+		Sama_2485	0.69	-0.1
2,988,356	-		Sama_2485	0.69	-1.1
2,988,395	-		Sama_2485	0.73	-0.7
2,988,446	+		Sama_2485	0.78	+0.4
2,988,446	+		Sama_2485	0.78	-0.3
2,988,447	-		Sama_2485	0.78	-2.2
2,988,447	-		Sama_2485	0.78	-1.0
2,988,447	-		Sama_2485	0.78	-1.2
2,988,450	+		Sama_2485	0.79	-0.9
2,988,450	+		Sama_2485	0.79	-0.6
2,988,450	+		Sama_2485	0.79	-2.1
2,988,450	+		Sama_2485	0.79	-2.5
2,988,450	+		Sama_2485	0.79	-0.2
2,988,450	+		Sama_2485	0.79	-0.7
2,988,450	+		Sama_2485	0.79	-0.3
2,988,450	+		Sama_2485	0.79	-1.1
2,988,451	-		Sama_2485	0.79	-2.0
2,988,451	-		Sama_2485	0.79	-2.0
2,988,451	-		Sama_2485	0.79	-1.6
2,988,451	-		Sama_2485	0.79	-0.9
2,988,451	-		Sama_2485	0.79	+1.7
2,988,451	-		Sama_2485	0.79	-2.0
2,988,451	-		Sama_2485	0.79	-2.1
2,988,451	-		Sama_2485	0.79	-0.9
2,988,451	-		Sama_2485	0.79	-1.3
2,988,493	+		Sama_2485	0.83	-2.5
2,988,494	-		Sama_2485	0.83	-0.0
2,988,503	-		Sama_2485	0.84	-2.2
2,988,503	-		Sama_2485	0.84	-1.1
2,988,520	+		Sama_2485	0.86	+0.1
2,988,520	+		Sama_2485	0.86	-3.5
2,988,521	-		Sama_2485	0.86	-3.5
2,988,521	-		Sama_2485	0.86	-0.7
2,988,521	-		Sama_2485	0.86	-2.3
2,988,545	-		Sama_2485	0.89	-0.8
2,988,608	+				-1.2
2,988,623	-				-1.2
2,988,623	-				-0.4
2,988,635	+				-0.3
2,988,636	-				-2.3
2,988,636	-				-1.7
2,988,644	+				-0.6
2,988,644	+				-0.6
2,988,645	-				+0.1
2,988,645	-				-1.6
2,988,645	-				-2.1
2,988,661	+				-1.2
2,988,661	+				-2.3
2,988,666	+				-0.6
2,988,715	+				-1.5
2,988,728	-				+1.7
2,988,746	-				+1.0
2,988,799	+				-1.0
2,988,799	+				-0.2
2,988,799	+				-1.4
2,988,800	-				-1.3
2,988,800	-				+0.6
2,988,800	-				+0.6
2,988,801	+				-1.6
2,988,968	+				+0.9
2,988,969	-				-0.9
2,988,969	-				-0.1
2,989,083	+		Sama_2486	0.14	+1.0
2,989,083	+		Sama_2486	0.14	-0.2
2,989,083	+		Sama_2486	0.14	-1.5
2,989,084	-		Sama_2486	0.14	+0.5
2,989,196	+		Sama_2486	0.28	+1.1
2,989,196	+		Sama_2486	0.28	+0.0
2,989,233	-		Sama_2486	0.32	+0.3
2,989,233	-		Sama_2486	0.32	-1.3
2,989,233	-		Sama_2486	0.32	+0.6
2,989,310	+		Sama_2486	0.42	-1.6
2,989,333	+		Sama_2486	0.44	-2.6
2,989,333	+		Sama_2486	0.44	+0.6
2,989,333	+		Sama_2486	0.44	-0.4
2,989,333	+		Sama_2486	0.44	-1.3
2,989,333	+		Sama_2486	0.44	-1.3
2,989,334	-		Sama_2486	0.45	+0.3
2,989,334	-		Sama_2486	0.45	+1.0
2,989,334	-		Sama_2486	0.45	-0.3
2,989,334	-		Sama_2486	0.45	-0.9
2,989,334	-		Sama_2486	0.45	-0.5
2,989,336	+		Sama_2486	0.45	-0.7
2,989,336	+		Sama_2486	0.45	-1.9
2,989,336	+		Sama_2486	0.45	+2.3
2,989,337	-		Sama_2486	0.45	+0.1
2,989,337	-		Sama_2486	0.45	+2.7
2,989,337	-		Sama_2486	0.45	-2.0
2,989,446	-		Sama_2486	0.58	-0.2
2,989,446	-		Sama_2486	0.58	-0.7
2,989,446	-		Sama_2486	0.58	+0.3
2,989,449	+		Sama_2486	0.59	+0.7
2,989,449	+		Sama_2486	0.59	+0.6
2,989,449	+		Sama_2486	0.59	-1.0
2,989,449	+		Sama_2486	0.59	-0.6
2,989,450	-		Sama_2486	0.59	-0.9
2,989,450	-		Sama_2486	0.59	-1.5
2,989,482	+		Sama_2486	0.63	+0.3
2,989,528	+		Sama_2486	0.68	+0.9
2,989,528	+		Sama_2486	0.68	-0.4
2,989,528	+		Sama_2486	0.68	-0.5
2,989,529	-		Sama_2486	0.69	+0.4
2,989,529	-		Sama_2486	0.69	-0.0
2,989,529	-		Sama_2486	0.69	+0.5
2,989,529	-		Sama_2486	0.69	-0.9
2,989,529	-		Sama_2486	0.69	+1.7