Strain Fitness in Shewanella amazonensis SB2B around Sama_2106

Experiment: D-Maltose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose
2,548,800	+		Sama_2104	0.70	+0.2
2,548,801	-		Sama_2104	0.70	-0.5
2,548,801	-		Sama_2104	0.70	+1.0
2,548,878	+				-0.4
2,548,879	-				+1.2
2,548,879	-				+0.5
2,548,882	+				+1.9
2,548,883	-				+0.4
2,548,883	-				+0.9
2,548,889	-				+1.1
2,548,892	+				-0.8
2,548,892	+				+0.1
2,548,931	+				-0.3
2,548,931	+				-0.2
2,548,969	+				-1.5
2,549,077	-		Sama_2105	0.15	-0.3
2,549,115	+		Sama_2105	0.21	-0.2
2,549,116	-		Sama_2105	0.21	+0.2
2,549,124	+		Sama_2105	0.22	-1.2
2,549,125	-		Sama_2105	0.22	-0.4
2,549,150	+		Sama_2105	0.26	+0.2
2,549,150	+		Sama_2105	0.26	-2.6
2,549,150	+		Sama_2105	0.26	-0.9
2,549,150	+		Sama_2105	0.26	-0.1
2,549,151	-		Sama_2105	0.26	+0.8
2,549,151	-		Sama_2105	0.26	-0.1
2,549,151	-		Sama_2105	0.26	-1.5
2,549,151	-		Sama_2105	0.26	-2.4
2,549,151	-		Sama_2105	0.26	-1.1
2,549,151	-		Sama_2105	0.26	-0.6
2,549,151	-		Sama_2105	0.26	-0.9
2,549,151	-		Sama_2105	0.26	-1.4
2,549,151	-		Sama_2105	0.26	+0.1
2,549,151	-		Sama_2105	0.26	-0.0
2,549,151	-		Sama_2105	0.26	-1.5
2,549,151	-		Sama_2105	0.26	-1.5
2,549,151	-		Sama_2105	0.26	-0.3
2,549,352	+		Sama_2105	0.54	-2.1
2,549,374	-		Sama_2105	0.58	-0.5
2,549,471	+		Sama_2105	0.71	-0.9
2,549,471	+		Sama_2105	0.71	-2.5
2,549,541	+		Sama_2105	0.81	-0.4
2,549,667	-				-1.3
2,549,674	+				-0.7
2,549,674	+				-1.9
2,549,675	-				-0.8
2,549,675	-				+0.8
2,549,715	-				-1.1
2,549,715	-				+0.2
2,549,715	-				+0.5
2,549,766	+				+2.1
2,549,766	+				+1.2
2,549,766	+				-2.4
2,549,767	-				-1.3
2,549,767	-				+0.5
2,549,767	-				-1.2
2,549,809	+		Sama_2106	0.15	+0.5
2,549,810	-		Sama_2106	0.15	+0.8
2,549,828	-		Sama_2106	0.20	-0.0
2,549,876	-		Sama_2106	0.31	-1.2
2,549,925	+		Sama_2106	0.42	-1.9
2,549,925	+		Sama_2106	0.42	+0.6
2,549,926	-		Sama_2106	0.42	+0.8
2,549,926	-		Sama_2106	0.42	+1.5
2,549,926	-		Sama_2106	0.42	+1.0
2,549,926	-		Sama_2106	0.42	+0.5
2,549,926	-		Sama_2106	0.42	+0.6
2,549,926	-		Sama_2106	0.42	+0.5
2,549,926	-		Sama_2106	0.42	+0.1
2,549,941	-		Sama_2106	0.46	-0.4
2,549,941	-		Sama_2106	0.46	+0.3
2,549,945	+		Sama_2106	0.47	+2.0
2,549,970	+		Sama_2106	0.53	-1.3
2,549,970	+		Sama_2106	0.53	+1.3
2,549,970	+		Sama_2106	0.53	-0.3
2,549,970	+		Sama_2106	0.53	-0.3
2,549,970	+		Sama_2106	0.53	+1.1
2,549,970	+		Sama_2106	0.53	-0.5
2,549,970	+		Sama_2106	0.53	-0.5
2,549,971	-		Sama_2106	0.53	-0.3
2,549,971	-		Sama_2106	0.53	+0.6
2,549,990	-		Sama_2106	0.57	+0.8
2,549,990	-		Sama_2106	0.57	+1.9
2,550,164	+				-1.4
2,550,164	+				+1.6
2,550,164	+				-0.2
2,550,164	+				+1.2
2,550,164	+				+0.2
2,550,188	+				-0.9
2,550,188	+				+0.5
2,550,189	-				-0.8
2,550,315	+				+1.2
2,550,316	-				+0.2
2,550,424	-				+0.2
2,550,520	-				-0.5
2,550,520	-				+0.1
2,550,542	-		Sama_2107	0.12	+0.1
2,550,558	-		Sama_2107	0.13	+1.1
2,550,670	+		Sama_2107	0.25	+1.7
2,550,689	+		Sama_2107	0.26	+0.3
2,550,689	+		Sama_2107	0.26	-0.3
2,550,690	-		Sama_2107	0.27	+1.0
2,550,694	+		Sama_2107	0.27	-1.1
2,550,695	-		Sama_2107	0.27	-0.2
2,550,712	+		Sama_2107	0.29	+2.2
2,550,712	+		Sama_2107	0.29	+0.5
2,550,712	+		Sama_2107	0.29	+0.0
2,550,713	-		Sama_2107	0.29	-1.1
2,550,713	-		Sama_2107	0.29	+0.5
2,550,713	-		Sama_2107	0.29	-0.0
2,550,747	+		Sama_2107	0.32	-0.5
2,550,748	-		Sama_2107	0.32	+0.7
2,550,827	+		Sama_2107	0.40	+0.5
2,550,848	+		Sama_2107	0.42	+0.1
2,550,854	-		Sama_2107	0.43	+0.5
2,550,882	+		Sama_2107	0.45	+0.1
2,550,882	+		Sama_2107	0.45	+0.9
2,550,883	-		Sama_2107	0.46	-0.4
2,550,968	-		Sama_2107	0.54	-1.1
2,550,968	-		Sama_2107	0.54	+0.2
2,550,968	-		Sama_2107	0.54	+0.1
2,550,980	+		Sama_2107	0.55	+1.5
2,550,981	-		Sama_2107	0.55	+0.6
2,550,981	-		Sama_2107	0.55	+0.9
2,550,981	-		Sama_2107	0.55	+1.2
2,550,986	+		Sama_2107	0.56	-2.9
2,550,986	+		Sama_2107	0.56	-0.9
2,550,987	-		Sama_2107	0.56	+1.2
2,551,027	-		Sama_2107	0.60	-0.1
2,551,027	-		Sama_2107	0.60	-0.0
2,551,027	-		Sama_2107	0.60	-0.5
2,551,064	-		Sama_2107	0.64	-1.3
2,551,064	-		Sama_2107	0.64	-0.9
2,551,080	+		Sama_2107	0.65	-0.1
2,551,080	+		Sama_2107	0.65	+1.3
2,551,081	-		Sama_2107	0.65	-0.1
2,551,081	-		Sama_2107	0.65	-0.1
2,551,102	+		Sama_2107	0.67	+0.7
2,551,102	+		Sama_2107	0.67	+0.3
2,551,103	-		Sama_2107	0.67	+0.6
2,551,164	+		Sama_2107	0.73	-0.5
2,551,164	+		Sama_2107	0.73	+1.3
2,551,164	+		Sama_2107	0.73	-1.4
2,551,164	+		Sama_2107	0.73	+0.2
2,551,164	+		Sama_2107	0.73	-0.3
2,551,164	+		Sama_2107	0.73	+0.1
2,551,164	+		Sama_2107	0.73	-0.3
2,551,164	+		Sama_2107	0.73	+0.1
2,551,164	+		Sama_2107	0.73	+1.6
2,551,164	+		Sama_2107	0.73	-0.9
2,551,164	+		Sama_2107	0.73	-1.5
2,551,165	-		Sama_2107	0.73	-1.4
2,551,165	-		Sama_2107	0.73	-1.0
2,551,165	-		Sama_2107	0.73	+0.5
2,551,165	-		Sama_2107	0.73	-2.6
2,551,165	-		Sama_2107	0.73	-0.1
2,551,165	-		Sama_2107	0.73	+1.2
2,551,165	-		Sama_2107	0.73	-0.3
2,551,165	-		Sama_2107	0.73	-0.2
2,551,165	-		Sama_2107	0.73	-0.3
2,551,165	-		Sama_2107	0.73	-0.2
2,551,165	-		Sama_2107	0.73	+2.1
2,551,165	-		Sama_2107	0.73	+0.4
2,551,165	-		Sama_2107	0.73	-0.4
2,551,165	-		Sama_2107	0.73	-1.9