Strain Fitness in Shewanella amazonensis SB2B around Sama_1657

Experiment: D-Maltose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose
2,022,580	+		Sama_1656	0.64	+1.2
2,022,580	+		Sama_1656	0.64	+2.1
2,022,581	-		Sama_1656	0.64	+0.3
2,022,583	+		Sama_1656	0.64	-0.9
2,022,583	+		Sama_1656	0.64	-1.2
2,022,584	-		Sama_1656	0.64	-1.7
2,022,584	-		Sama_1656	0.64	-0.9
2,022,584	-		Sama_1656	0.64	+0.2
2,022,584	-		Sama_1656	0.64	-1.1
2,022,584	-		Sama_1656	0.64	+0.2
2,022,584	-		Sama_1656	0.64	-0.7
2,022,622	-		Sama_1656	0.66	+0.1
2,022,712	-		Sama_1656	0.70	+1.3
2,022,842	+		Sama_1656	0.75	+0.7
2,022,842	+		Sama_1656	0.75	+0.7
2,022,842	+		Sama_1656	0.75	+0.1
2,022,843	-		Sama_1656	0.75	-0.8
2,022,939	+		Sama_1656	0.79	+0.3
2,022,968	-		Sama_1656	0.80	-2.8
2,023,044	+		Sama_1656	0.83	-1.0
2,023,061	+		Sama_1656	0.84	-0.1
2,023,117	-		Sama_1656	0.86	-0.2
2,023,163	+		Sama_1656	0.88	+0.7
2,023,163	+		Sama_1656	0.88	+0.6
2,023,163	+		Sama_1656	0.88	+0.7
2,023,163	+		Sama_1656	0.88	-2.2
2,023,163	+		Sama_1656	0.88	+0.6
2,023,163	+		Sama_1656	0.88	+0.7
2,023,163	+		Sama_1656	0.88	+0.3
2,023,163	+		Sama_1656	0.88	+0.2
2,023,164	-		Sama_1656	0.88	+1.1
2,023,164	-		Sama_1656	0.88	-2.5
2,023,164	-		Sama_1656	0.88	+0.4
2,023,164	-		Sama_1656	0.88	+2.1
2,023,164	-		Sama_1656	0.88	+0.0
2,023,164	-		Sama_1656	0.88	+2.5
2,023,164	-		Sama_1656	0.88	+0.5
2,023,199	+		Sama_1656	0.89	-1.0
2,023,230	+				-0.3
2,023,230	+				-0.1
2,023,231	-				+0.0
2,023,238	+				+0.5
2,023,238	+				-0.3
2,023,238	+				-0.0
2,023,238	+				+0.3
2,023,239	-				-0.1
2,023,239	-				+1.0
2,023,239	-				-0.7
2,023,253	+				+0.2
2,023,253	+				-2.5
2,023,253	+				-0.1
2,023,254	-				+0.3
2,023,254	-				+1.6
2,023,254	-				-3.2
2,023,273	+				+0.3
2,023,273	+				-0.3
2,023,274	-				-0.5
2,023,475	+				+0.7
2,023,479	+				-0.7
2,023,479	+				+0.8
2,023,479	+				+0.3
2,023,479	+				-1.2
2,023,479	+				-0.2
2,023,480	-				+0.3
2,023,535	+				-2.5
2,023,535	+				-3.1
2,023,535	+				-2.4
2,023,538	+				-1.4
2,023,556	+				-1.5
2,023,556	+				-2.0
2,023,587	+				-1.2
2,023,587	+				-3.1
2,023,587	+				-3.7
2,023,587	+				-2.7
2,023,588	-				-2.5
2,023,588	-				-2.7
2,023,588	-				-1.5
2,023,588	-				-0.4
2,023,588	-				-2.2
2,023,588	-				-1.1
2,023,588	-				-2.5
2,023,590	-				-3.0
2,023,590	-				-3.9
2,023,686	+		Sama_1657	0.13	-2.0
2,023,686	+		Sama_1657	0.13	+1.1
2,023,686	+		Sama_1657	0.13	-1.7
2,023,687	-		Sama_1657	0.13	-2.7
2,023,687	-		Sama_1657	0.13	-2.5
2,023,687	-		Sama_1657	0.13	-2.5
2,023,687	-		Sama_1657	0.13	-0.7
2,023,687	-		Sama_1657	0.13	-4.1
2,023,687	-		Sama_1657	0.13	-0.7
2,023,687	-		Sama_1657	0.13	-3.2
2,023,687	-		Sama_1657	0.13	-3.2
2,023,687	-		Sama_1657	0.13	-2.9
2,023,687	-		Sama_1657	0.13	-2.9
2,023,687	-		Sama_1657	0.13	-0.7
2,023,688	+		Sama_1657	0.13	-1.7
2,023,688	+		Sama_1657	0.13	-3.7
2,023,689	-		Sama_1657	0.14	-0.7
2,023,689	-		Sama_1657	0.14	-2.6
2,023,689	-		Sama_1657	0.14	-2.5
2,023,689	-		Sama_1657	0.14	-3.6
2,023,689	-		Sama_1657	0.14	-3.7
2,023,689	-		Sama_1657	0.14	-2.5
2,023,732	-		Sama_1657	0.16	-3.6
2,023,812	+		Sama_1657	0.21	-2.2
2,023,813	-		Sama_1657	0.22	-3.4
2,023,877	+		Sama_1657	0.26	-2.5
2,023,877	+		Sama_1657	0.26	-2.2
2,023,878	-		Sama_1657	0.26	-3.2
2,023,882	+		Sama_1657	0.26	-4.2
2,023,882	+		Sama_1657	0.26	-2.2
2,023,883	-		Sama_1657	0.26	-2.8
2,023,883	-		Sama_1657	0.26	-0.2
2,023,883	-		Sama_1657	0.26	-3.9
2,023,883	-		Sama_1657	0.26	-2.7
2,023,883	-		Sama_1657	0.26	-1.5
2,023,883	-		Sama_1657	0.26	-2.0
2,023,883	-		Sama_1657	0.26	-2.7
2,023,883	-		Sama_1657	0.26	-2.1
2,023,883	-		Sama_1657	0.26	-1.8
2,023,883	-		Sama_1657	0.26	-2.2
2,023,929	+		Sama_1657	0.29	-2.2
2,023,929	+		Sama_1657	0.29	-3.6
2,023,929	+		Sama_1657	0.29	-1.0
2,023,929	+		Sama_1657	0.29	-2.5
2,023,929	+		Sama_1657	0.29	-1.7
2,023,972	-		Sama_1657	0.32	-2.1
2,023,972	-		Sama_1657	0.32	-3.6
2,024,007	+		Sama_1657	0.34	-3.2
2,024,007	+		Sama_1657	0.34	-3.1
2,024,008	-		Sama_1657	0.34	-1.5
2,024,008	-		Sama_1657	0.34	-3.1
2,024,032	-		Sama_1657	0.36	-2.5
2,024,120	+		Sama_1657	0.41	-2.0
2,024,121	-		Sama_1657	0.41	-2.7
2,024,121	-		Sama_1657	0.41	-2.8
2,024,172	-		Sama_1657	0.45	-1.7
2,024,188	-		Sama_1657	0.46	-1.7
2,024,213	+		Sama_1657	0.47	-2.7
2,024,213	+		Sama_1657	0.47	-2.8
2,024,214	-		Sama_1657	0.47	-3.5
2,024,214	-		Sama_1657	0.47	-3.2
2,024,232	+		Sama_1657	0.48	-1.2
2,024,232	+		Sama_1657	0.48	-3.1
2,024,233	-		Sama_1657	0.48	-4.1
2,024,233	-		Sama_1657	0.48	-1.5
2,024,233	-		Sama_1657	0.48	-2.7
2,024,233	-		Sama_1657	0.48	-1.2
2,024,233	-		Sama_1657	0.48	-0.8
2,024,297	+		Sama_1657	0.53	-2.7
2,024,329	+		Sama_1657	0.55	-3.0
2,024,397	+		Sama_1657	0.59	-2.2
2,024,458	-		Sama_1657	0.63	-2.4
2,024,458	-		Sama_1657	0.63	-2.5
2,024,466	+		Sama_1657	0.63	-2.5
2,024,524	+		Sama_1657	0.67	-4.1
2,024,536	-		Sama_1657	0.68	-3.5
2,024,564	+		Sama_1657	0.70	-2.1
2,024,630	+		Sama_1657	0.74	-3.1
2,024,631	-		Sama_1657	0.74	-3.0
2,024,631	-		Sama_1657	0.74	-3.5
2,024,631	-		Sama_1657	0.74	-2.5
2,024,665	+		Sama_1657	0.76	-1.7
2,024,665	+		Sama_1657	0.76	-3.2
2,024,666	-		Sama_1657	0.76	-2.8
2,024,709	+		Sama_1657	0.79	-1.2
2,024,709	+		Sama_1657	0.79	-3.9
2,024,728	+		Sama_1657	0.80	-3.2
2,024,770	-		Sama_1657	0.83	-4.1
2,024,909	-				-2.0
2,025,005	-				-2.2
2,025,034	+				-2.8
2,025,034	+				-1.2
2,025,034	+				-3.8
2,025,034	+				-3.0
2,025,034	+				-1.8
2,025,035	-				-2.5
2,025,035	-				-2.2
2,025,035	-				-4.0
2,025,035	-				-2.5
2,025,035	-				-3.1
2,025,181	+				-2.8
2,025,238	+				-3.2
2,025,239	-				-0.7
2,025,257	-				-1.2
2,025,257	-				-1.0
2,025,265	+				-3.1
2,025,272	+				-3.1
2,025,272	+				-3.7
2,025,273	-				-2.5
2,025,283	+				-2.5
2,025,284	-				-2.7
2,025,284	-				-1.1
2,025,284	-				-1.1
2,025,287	+				-4.1
2,025,287	+				-1.7
2,025,287	+				-1.7
2,025,287	+				-2.7
2,025,288	-				-3.1
2,025,288	-				-0.2
2,025,288	-				-0.3
2,025,288	-				-0.9
2,025,288	-				-2.0
2,025,288	-				-3.5
2,025,288	-				-1.2
2,025,288	-				+0.3
2,025,288	-				-2.8
2,025,291	+				-2.2
2,025,291	+				-2.2
2,025,292	-				-2.2
2,025,292	-				-1.0
2,025,292	-				-3.0
2,025,292	-				-3.5
2,025,295	+				-1.2
2,025,295	+				-3.0
2,025,296	-				-1.9
2,025,296	-				-1.4
2,025,296	-				-2.7
2,025,449	+				+1.0
2,025,523	+		Sama_1658	0.12	-0.7
2,025,523	+		Sama_1658	0.12	-1.7
2,025,524	-		Sama_1658	0.12	-0.4
2,025,524	-		Sama_1658	0.12	-0.9
2,025,524	-		Sama_1658	0.12	-1.1
2,025,524	-		Sama_1658	0.12	-0.4
2,025,524	-		Sama_1658	0.12	+0.6
2,025,592	+		Sama_1658	0.22	+0.8
2,025,677	+		Sama_1658	0.35	+0.0
2,025,677	+		Sama_1658	0.35	-2.8
2,025,678	-		Sama_1658	0.35	-0.7
2,025,678	-		Sama_1658	0.35	-2.5
2,025,678	-		Sama_1658	0.35	+0.0
2,025,678	-		Sama_1658	0.35	-1.2
2,025,678	-		Sama_1658	0.35	-0.4
2,025,681	+		Sama_1658	0.36	-0.1
2,025,681	+		Sama_1658	0.36	+0.8
2,025,681	+		Sama_1658	0.36	-0.2
2,025,681	+		Sama_1658	0.36	-1.1
2,025,681	+		Sama_1658	0.36	-0.3
2,025,681	+		Sama_1658	0.36	+0.1
2,025,681	+		Sama_1658	0.36	+0.2
2,025,681	+		Sama_1658	0.36	+2.2
2,025,681	+		Sama_1658	0.36	-0.6
2,025,681	+		Sama_1658	0.36	+0.9
2,025,681	+		Sama_1658	0.36	-0.2
2,025,681	+		Sama_1658	0.36	+0.6
2,025,682	-		Sama_1658	0.36	-1.7
2,025,682	-		Sama_1658	0.36	+0.0
2,025,682	-		Sama_1658	0.36	+0.8
2,025,682	-		Sama_1658	0.36	-0.3
2,025,682	-		Sama_1658	0.36	-2.0
2,025,696	-		Sama_1658	0.38	-0.7
2,025,696	-		Sama_1658	0.38	-0.2
2,025,746	+		Sama_1658	0.45	-0.1
2,025,746	+		Sama_1658	0.45	-0.7
2,025,746	+		Sama_1658	0.45	-0.1
2,025,747	-		Sama_1658	0.46	-0.4
2,025,757	+		Sama_1658	0.47	+0.0
2,025,869	+		Sama_1658	0.64	-0.6
2,025,869	+		Sama_1658	0.64	-2.8
2,025,870	-		Sama_1658	0.64	-0.4
2,025,895	-		Sama_1658	0.68	+0.2