Strain Fitness in Shewanella amazonensis SB2B around Sama_1656

Experiment: D-Maltose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose
2,020,037	-		Sama_1655	0.28	-2.2
2,020,066	+		Sama_1655	0.30	-0.7
2,020,066	+		Sama_1655	0.30	-1.5
2,020,066	+		Sama_1655	0.30	-1.2
2,020,066	+		Sama_1655	0.30	-2.7
2,020,067	-		Sama_1655	0.31	-1.7
2,020,067	-		Sama_1655	0.31	-3.0
2,020,078	+		Sama_1655	0.32	-2.0
2,020,145	+		Sama_1655	0.38	-1.2
2,020,145	+		Sama_1655	0.38	-1.7
2,020,172	-		Sama_1655	0.40	-3.7
2,020,174	+		Sama_1655	0.40	-2.8
2,020,205	+		Sama_1655	0.43	-3.1
2,020,206	-		Sama_1655	0.43	-1.7
2,020,206	-		Sama_1655	0.43	-2.4
2,020,320	+		Sama_1655	0.53	-3.7
2,020,320	+		Sama_1655	0.53	-1.8
2,020,323	+		Sama_1655	0.54	-3.5
2,020,323	+		Sama_1655	0.54	-2.7
2,020,324	-		Sama_1655	0.54	-1.9
2,020,338	+		Sama_1655	0.55	-2.2
2,020,338	+		Sama_1655	0.55	-2.2
2,020,339	-		Sama_1655	0.55	-0.1
2,020,435	+		Sama_1655	0.64	-1.5
2,020,435	+		Sama_1655	0.64	-3.8
2,020,436	-		Sama_1655	0.64	-3.2
2,020,522	+		Sama_1655	0.72	-1.7
2,020,643	+		Sama_1655	0.83	-1.2
2,020,643	+		Sama_1655	0.83	-3.1
2,020,644	-		Sama_1655	0.83	-1.7
2,020,651	+		Sama_1655	0.84	-3.7
2,020,687	+		Sama_1655	0.87	-3.2
2,020,687	+		Sama_1655	0.87	-2.2
2,020,687	+		Sama_1655	0.87	-2.7
2,020,688	-		Sama_1655	0.87	-3.7
2,020,776	+				-2.0
2,020,882	+				-0.1
2,020,972	+				-1.0
2,020,972	+				+1.8
2,020,973	-				+0.6
2,020,986	+				-0.1
2,020,987	-				-0.1
2,021,006	+				-1.5
2,021,007	-				+0.4
2,021,042	+				+0.6
2,021,042	+				-0.4
2,021,043	-				+0.9
2,021,043	-				+0.2
2,021,046	+				+0.1
2,021,086	+				-0.9
2,021,090	+				+2.9
2,021,130	+				+0.2
2,021,130	+				-0.4
2,021,131	-				+0.4
2,021,199	+				+0.3
2,021,200	-				-0.1
2,021,237	+				-1.7
2,021,237	+				-0.7
2,021,238	-				-2.0
2,021,238	-				+2.5
2,021,241	+				+0.1
2,021,241	+				+1.2
2,021,241	+				+1.4
2,021,242	-				+0.3
2,021,242	-				-0.2
2,021,242	-				+1.0
2,021,242	-				+1.1
2,021,309	+		Sama_1656	0.12	-2.5
2,021,309	+		Sama_1656	0.12	-0.7
2,021,384	+		Sama_1656	0.15	-0.4
2,021,385	-		Sama_1656	0.15	+1.1
2,021,385	-		Sama_1656	0.15	-0.7
2,021,404	-		Sama_1656	0.16	+0.4
2,021,404	-		Sama_1656	0.16	+0.4
2,021,632	-		Sama_1656	0.26	-0.1
2,021,632	-		Sama_1656	0.26	+0.6
2,021,689	-		Sama_1656	0.28	-1.2
2,021,689	-		Sama_1656	0.28	-1.2
2,021,690	+		Sama_1656	0.28	-2.0
2,021,691	-		Sama_1656	0.28	+0.3
2,021,691	-		Sama_1656	0.28	-0.2
2,021,722	+		Sama_1656	0.29	+0.7
2,021,727	+		Sama_1656	0.29	-0.2
2,021,750	+		Sama_1656	0.30	+0.5
2,021,750	+		Sama_1656	0.30	-0.1
2,021,750	+		Sama_1656	0.30	+0.2
2,021,751	-		Sama_1656	0.30	-0.1
2,021,771	+		Sama_1656	0.31	+1.7
2,021,853	+		Sama_1656	0.35	+0.7
2,021,853	+		Sama_1656	0.35	-0.3
2,021,853	+		Sama_1656	0.35	-1.5
2,021,853	+		Sama_1656	0.35	+1.2
2,021,854	-		Sama_1656	0.35	-0.5
2,021,854	-		Sama_1656	0.35	+0.1
2,021,854	-		Sama_1656	0.35	+0.3
2,021,854	-		Sama_1656	0.35	-0.4
2,021,854	-		Sama_1656	0.35	-0.9
2,021,917	-		Sama_1656	0.37	-1.1
2,021,917	-		Sama_1656	0.37	+0.3
2,021,938	-		Sama_1656	0.38	+0.6
2,022,052	-		Sama_1656	0.43	-0.3
2,022,052	-		Sama_1656	0.43	-0.8
2,022,095	-		Sama_1656	0.44	-0.4
2,022,095	-		Sama_1656	0.44	+0.6
2,022,095	-		Sama_1656	0.44	-0.2
2,022,276	-		Sama_1656	0.52	+0.1
2,022,301	+		Sama_1656	0.53	+0.1
2,022,301	+		Sama_1656	0.53	+0.3
2,022,301	+		Sama_1656	0.53	+0.1
2,022,301	+		Sama_1656	0.53	-0.3
2,022,301	+		Sama_1656	0.53	+0.2
2,022,301	+		Sama_1656	0.53	+0.0
2,022,302	-		Sama_1656	0.53	-2.1
2,022,302	-		Sama_1656	0.53	+0.1
2,022,307	-		Sama_1656	0.53	-0.8
2,022,580	+		Sama_1656	0.64	+1.2
2,022,580	+		Sama_1656	0.64	+2.1
2,022,581	-		Sama_1656	0.64	+0.3
2,022,583	+		Sama_1656	0.64	-0.9
2,022,583	+		Sama_1656	0.64	-1.2
2,022,584	-		Sama_1656	0.64	-1.7
2,022,584	-		Sama_1656	0.64	-0.9
2,022,584	-		Sama_1656	0.64	+0.2
2,022,584	-		Sama_1656	0.64	-1.1
2,022,584	-		Sama_1656	0.64	+0.2
2,022,584	-		Sama_1656	0.64	-0.7
2,022,622	-		Sama_1656	0.66	+0.1
2,022,712	-		Sama_1656	0.70	+1.3
2,022,842	+		Sama_1656	0.75	+0.7
2,022,842	+		Sama_1656	0.75	+0.7
2,022,842	+		Sama_1656	0.75	+0.1
2,022,843	-		Sama_1656	0.75	-0.8
2,022,939	+		Sama_1656	0.79	+0.3
2,022,968	-		Sama_1656	0.80	-2.8
2,023,044	+		Sama_1656	0.83	-1.0
2,023,061	+		Sama_1656	0.84	-0.1
2,023,117	-		Sama_1656	0.86	-0.2
2,023,163	+		Sama_1656	0.88	+0.7
2,023,163	+		Sama_1656	0.88	+0.6
2,023,163	+		Sama_1656	0.88	+0.7
2,023,163	+		Sama_1656	0.88	-2.2
2,023,163	+		Sama_1656	0.88	+0.6
2,023,163	+		Sama_1656	0.88	+0.7
2,023,163	+		Sama_1656	0.88	+0.3
2,023,163	+		Sama_1656	0.88	+0.2
2,023,164	-		Sama_1656	0.88	+1.1
2,023,164	-		Sama_1656	0.88	-2.5
2,023,164	-		Sama_1656	0.88	+0.4
2,023,164	-		Sama_1656	0.88	+2.1
2,023,164	-		Sama_1656	0.88	+0.0
2,023,164	-		Sama_1656	0.88	+2.5
2,023,164	-		Sama_1656	0.88	+0.5
2,023,199	+		Sama_1656	0.89	-1.0
2,023,230	+				-0.3
2,023,230	+				-0.1
2,023,231	-				+0.0
2,023,238	+				+0.5
2,023,238	+				-0.3
2,023,238	+				-0.0
2,023,238	+				+0.3
2,023,239	-				-0.1
2,023,239	-				+1.0
2,023,239	-				-0.7
2,023,253	+				+0.2
2,023,253	+				-2.5
2,023,253	+				-0.1
2,023,254	-				+0.3
2,023,254	-				+1.6
2,023,254	-				-3.2
2,023,273	+				+0.3
2,023,273	+				-0.3
2,023,274	-				-0.5
2,023,475	+				+0.7
2,023,479	+				-0.7
2,023,479	+				+0.8
2,023,479	+				+0.3
2,023,479	+				-1.2
2,023,479	+				-0.2
2,023,480	-				+0.3
2,023,535	+				-2.5
2,023,535	+				-3.1
2,023,535	+				-2.4
2,023,538	+				-1.4
2,023,556	+				-1.5
2,023,556	+				-2.0
2,023,587	+				-1.2
2,023,587	+				-3.1
2,023,587	+				-3.7
2,023,587	+				-2.7
2,023,588	-				-2.5
2,023,588	-				-2.7
2,023,588	-				-1.5
2,023,588	-				-0.4
2,023,588	-				-2.2
2,023,588	-				-1.1
2,023,588	-				-2.5
2,023,590	-				-3.0
2,023,590	-				-3.9
2,023,686	+		Sama_1657	0.13	-2.0
2,023,686	+		Sama_1657	0.13	+1.1
2,023,686	+		Sama_1657	0.13	-1.7
2,023,687	-		Sama_1657	0.13	-2.7
2,023,687	-		Sama_1657	0.13	-2.5
2,023,687	-		Sama_1657	0.13	-2.5
2,023,687	-		Sama_1657	0.13	-0.7
2,023,687	-		Sama_1657	0.13	-4.1
2,023,687	-		Sama_1657	0.13	-0.7
2,023,687	-		Sama_1657	0.13	-3.2
2,023,687	-		Sama_1657	0.13	-3.2
2,023,687	-		Sama_1657	0.13	-2.9
2,023,687	-		Sama_1657	0.13	-2.9
2,023,687	-		Sama_1657	0.13	-0.7
2,023,688	+		Sama_1657	0.13	-1.7
2,023,688	+		Sama_1657	0.13	-3.7
2,023,689	-		Sama_1657	0.14	-0.7
2,023,689	-		Sama_1657	0.14	-2.6
2,023,689	-		Sama_1657	0.14	-2.5
2,023,689	-		Sama_1657	0.14	-3.6
2,023,689	-		Sama_1657	0.14	-3.7
2,023,689	-		Sama_1657	0.14	-2.5
2,023,732	-		Sama_1657	0.16	-3.6
2,023,812	+		Sama_1657	0.21	-2.2
2,023,813	-		Sama_1657	0.22	-3.4
2,023,877	+		Sama_1657	0.26	-2.5
2,023,877	+		Sama_1657	0.26	-2.2
2,023,878	-		Sama_1657	0.26	-3.2
2,023,882	+		Sama_1657	0.26	-4.2
2,023,882	+		Sama_1657	0.26	-2.2
2,023,883	-		Sama_1657	0.26	-2.8
2,023,883	-		Sama_1657	0.26	-0.2
2,023,883	-		Sama_1657	0.26	-3.9
2,023,883	-		Sama_1657	0.26	-2.7
2,023,883	-		Sama_1657	0.26	-1.5
2,023,883	-		Sama_1657	0.26	-2.0
2,023,883	-		Sama_1657	0.26	-2.7
2,023,883	-		Sama_1657	0.26	-2.1
2,023,883	-		Sama_1657	0.26	-1.8
2,023,883	-		Sama_1657	0.26	-2.2
2,023,929	+		Sama_1657	0.29	-2.2
2,023,929	+		Sama_1657	0.29	-3.6
2,023,929	+		Sama_1657	0.29	-1.0
2,023,929	+		Sama_1657	0.29	-2.5
2,023,929	+		Sama_1657	0.29	-1.7
2,023,972	-		Sama_1657	0.32	-2.1
2,023,972	-		Sama_1657	0.32	-3.6
2,024,007	+		Sama_1657	0.34	-3.2
2,024,007	+		Sama_1657	0.34	-3.1
2,024,008	-		Sama_1657	0.34	-1.5
2,024,008	-		Sama_1657	0.34	-3.1
2,024,032	-		Sama_1657	0.36	-2.5
2,024,120	+		Sama_1657	0.41	-2.0
2,024,121	-		Sama_1657	0.41	-2.7
2,024,121	-		Sama_1657	0.41	-2.8
2,024,172	-		Sama_1657	0.45	-1.7
2,024,188	-		Sama_1657	0.46	-1.7
2,024,213	+		Sama_1657	0.47	-2.7
2,024,213	+		Sama_1657	0.47	-2.8
2,024,214	-		Sama_1657	0.47	-3.5
2,024,214	-		Sama_1657	0.47	-3.2
2,024,232	+		Sama_1657	0.48	-1.2
2,024,232	+		Sama_1657	0.48	-3.1
2,024,233	-		Sama_1657	0.48	-4.1
2,024,233	-		Sama_1657	0.48	-1.5
2,024,233	-		Sama_1657	0.48	-2.7
2,024,233	-		Sama_1657	0.48	-1.2
2,024,233	-		Sama_1657	0.48	-0.8
2,024,297	+		Sama_1657	0.53	-2.7
2,024,329	+		Sama_1657	0.55	-3.0
2,024,397	+		Sama_1657	0.59	-2.2
2,024,458	-		Sama_1657	0.63	-2.4
2,024,458	-		Sama_1657	0.63	-2.5