Strain Fitness in Shewanella loihica PV-4 around Shew_3855

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
4,584,112	+				-1.4
4,584,118	-				-2.5
4,584,118	-				-4.8
4,584,132	-				-0.6
4,584,260	-		Shew_3854	0.11	-1.5
4,584,260	-		Shew_3854	0.11	-1.4
4,584,436	+		Shew_3854	0.33	-2.6
4,584,444	-		Shew_3854	0.34	-2.0
4,584,444	-		Shew_3854	0.34	-2.0
4,584,818	+		Shew_3854	0.82	-2.8
4,584,963	+				-1.7
4,585,049	-				-1.2
4,585,051	-				-2.3
4,585,135	+	gidB	Shew_3855	0.11	-2.2
4,585,143	-	gidB	Shew_3855	0.12	-1.1
4,585,192	-	gidB	Shew_3855	0.19	-1.6
4,585,343	-	gidB	Shew_3855	0.40	-0.9
4,585,399	+	gidB	Shew_3855	0.48	-1.6
4,585,738	-				-0.5
4,586,416	+		Shew_3856	0.33	-1.6