Strain Fitness in Shewanella loihica PV-4 around Shew_3740

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
4,453,944	+				+2.8
4,453,944	+				-0.2
4,453,952	-				-0.9
4,454,110	+		Shew_3740	0.18	-0.8
4,454,230	+		Shew_3740	0.26	-0.3
4,454,238	-		Shew_3740	0.27	-0.4
4,454,382	+		Shew_3740	0.37	+0.5
4,454,390	-		Shew_3740	0.37	-0.9
4,454,390	-		Shew_3740	0.37	-0.2
4,454,658	+		Shew_3740	0.56	-0.6
4,454,666	-		Shew_3740	0.56	-2.1
4,455,185	+				-1.6
4,455,185	+				-2.7
4,455,193	-				-0.6
4,455,319	-				+0.7
4,455,375	-				+0.4
4,455,416	-				+0.4
4,455,678	+		Shew_3741	0.30	-0.8
4,455,737	-		Shew_3741	0.35	-0.1
4,455,753	-		Shew_3741	0.36	+1.0
4,455,896	+		Shew_3741	0.48	-0.6
4,455,979	-		Shew_3741	0.55	-0.0
4,456,021	-		Shew_3741	0.59	+0.0
4,456,273	-		Shew_3741	0.80	-0.1