Strain Fitness in Shewanella loihica PV-4 around Shew_3432

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
4,097,892	-	aceE	Shew_3431	0.75	+3.5
4,097,997	+	aceE	Shew_3431	0.79	+4.2
4,098,011	-	aceE	Shew_3431	0.80	+3.3
4,098,643	+				+3.4
4,098,646	-				+1.4
4,098,953	+	pdhR	Shew_3432	0.45	+3.6
4,099,029	+	pdhR	Shew_3432	0.55	+3.3
4,099,185	-	pdhR	Shew_3432	0.75	+3.9
4,099,515	+				+0.2
4,099,783	-		Shew_3433	0.21	+1.4
4,099,992	+		Shew_3433	0.45	+0.5
4,100,001	+		Shew_3433	0.46	+1.6
4,100,007	+		Shew_3433	0.47	+0.1
4,100,156	-		Shew_3433	0.64	+0.6
4,100,162	+		Shew_3433	0.65	+0.1
4,100,231	+		Shew_3433	0.73	+0.3
4,100,277	-		Shew_3433	0.79	+0.7