Strain Fitness in Shewanella loihica PV-4 around Shew_3365

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
4,011,162	+		Shew_3363	0.41	+2.9
4,011,252	-		Shew_3363	0.61	+2.2
4,011,380	+		Shew_3363	0.89	+2.4
4,011,393	-				+2.1
4,011,403	+				+0.6
4,011,708	-		Shew_3364	0.63	-0.4
4,011,745	-		Shew_3364	0.72	+0.6
4,012,438	-		Shew_3365	0.39	+0.2
4,012,438	-		Shew_3365	0.39	+0.1
4,012,522	-		Shew_3365	0.46	-0.4
4,012,842	-		Shew_3365	0.69	+1.2
4,013,103	-		Shew_3365	0.88	-0.2
4,013,122	-		Shew_3365	0.90	+1.5
4,013,171	+				+0.2
4,013,174	-				-2.5
4,013,179	-				-0.1
4,013,179	-				-0.2
4,013,405	-				-0.0
4,013,405	-				+0.5
4,013,473	-				+1.1
4,013,799	-		Shew_3366	0.15	-0.9
4,013,852	-		Shew_3366	0.16	+0.2
4,014,116	+		Shew_3366	0.25	-0.4
4,014,119	-		Shew_3366	0.25	+0.8
4,014,126	-		Shew_3366	0.25	+0.2
4,014,154	-		Shew_3366	0.26	+1.1
4,014,200	-		Shew_3366	0.27	+0.3