Strain Fitness in Shewanella loihica PV-4 around Shew_3340

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,982,804	+				-0.4
3,983,064	+				+0.9
3,983,072	-				+0.7
3,983,808	-				-0.7
3,983,821	-		Shew_3340	0.10	-0.6
3,983,936	+		Shew_3340	0.16	-0.0
3,983,941	+		Shew_3340	0.16	+0.4
3,984,267	+		Shew_3340	0.32	-0.9
3,984,275	-		Shew_3340	0.32	-0.8
3,984,295	-		Shew_3340	0.33	-0.4
3,984,404	+		Shew_3340	0.38	-0.9
3,984,468	+		Shew_3340	0.41	-0.8
3,984,668	+		Shew_3340	0.51	-0.8
3,984,668	+		Shew_3340	0.51	-0.7
3,984,940	+		Shew_3340	0.64	-0.3
3,984,951	+		Shew_3340	0.65	-0.4
3,985,440	-		Shew_3340	0.89	-1.6
3,985,488	+				-0.1
3,985,488	+				+0.8
3,985,693	+				-0.1
3,985,778	+				+0.9
3,985,788	-				-0.4
3,985,887	+		Shew_3341	0.14	+0.1
3,986,541	+		Shew_3341	0.81	-2.6
3,986,588	+		Shew_3341	0.86	-0.0