Strain Fitness in Shewanella loihica PV-4 around Shew_R0108

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,883,415	-				+0.7
3,883,456	-		Shew_3246	0.15	-0.5
3,883,481	-		Shew_3246	0.19	-0.3
3,883,809	+		Shew_3246	0.67	-0.3
3,883,855	+		Shew_3246	0.74	-0.6
3,883,863	-		Shew_3246	0.75	+1.3
3,883,946	-		Shew_3246	0.87	+1.0
3,883,951	-		Shew_3246	0.88	+0.6
3,884,000	-				+0.6
3,884,038	+				+0.0
3,884,046	-				+3.9
3,884,046	-				-0.2
3,884,105	-				+1.3
3,884,542	-				+0.7
3,884,888	+		Shew_3247	0.64	+0.7
3,885,097	-				+0.2
3,885,176	-		Shew_3248	0.18	+0.3
3,885,329	-		Shew_3248	0.43	-0.3
3,885,432	-		Shew_3248	0.60	-1.0
3,885,432	-		Shew_3248	0.60	+0.3