Strain Fitness in Shewanella loihica PV-4 around Shew_3124

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,712,400	+		Shew_3123	0.62	-0.5
3,712,565	+		Shew_3123	0.69	+1.2
3,712,565	+		Shew_3123	0.69	-1.8
3,712,573	-		Shew_3123	0.69	+1.5
3,712,573	-		Shew_3123	0.69	+0.9
3,712,573	-		Shew_3123	0.69	+1.8
3,712,573	-		Shew_3123	0.69	+0.8
3,712,573	-		Shew_3123	0.69	+0.9
3,712,597	-		Shew_3123	0.70	+1.1
3,712,995	-		Shew_3123	0.87	+1.2
3,712,997	+		Shew_3123	0.87	+1.2
3,713,404	+				+1.4
3,713,702	-		Shew_3124	0.15	+0.6
3,713,733	+		Shew_3124	0.16	+2.5
3,714,311	-		Shew_3124	0.39	+0.1
3,714,524	+		Shew_3124	0.47	+0.6
3,714,626	-		Shew_3124	0.51	+0.4
3,715,239	-		Shew_3124	0.76	+0.4
3,715,610	-				+1.0
3,715,695	-				+0.2
3,715,839	+				+0.5
3,715,984	-				-0.7
3,715,984	-				-1.1
3,716,038	+				-1.0
3,716,262	+		Shew_3125	0.14	-0.9
3,716,278	+		Shew_3125	0.15	-0.5
3,716,309	-		Shew_3125	0.16	-1.5
3,716,388	-		Shew_3125	0.20	-0.1
3,716,559	-		Shew_3125	0.28	+0.4