Strain Fitness in Shewanella loihica PV-4 around Shew_2974
Experiment: Cephalothin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,528,329 | + | -2.0 | |||
3,528,940 | + | Shew_2974 | 0.70 | +1.2 | |
3,529,053 | + | +0.2 | |||
3,529,124 | - | -0.2 | |||
3,529,137 | + | +0.3 | |||
3,529,162 | + | -0.9 | |||
3,529,173 | + | +0.1 | |||
3,529,353 | - | -0.1 | |||
3,529,515 | + | Shew_2975 | 0.33 | -1.3 | |
3,529,698 | + | Shew_2975 | 0.60 | -0.9 | |
3,529,706 | - | Shew_2975 | 0.61 | +1.5 | |
3,529,756 | - | Shew_2975 | 0.68 | -0.2 | |
3,529,961 | - | -0.1 | |||
3,530,030 | - | -0.7 |
Or see this region's nucleotide sequence