Strain Fitness in Shewanella loihica PV-4 around Shew_2739

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
3,234,913	-				-0.7
3,234,913	-				+0.3
3,234,986	+				-1.6
3,234,986	+				+0.3
3,234,986	+				+0.5
3,234,994	-				-0.4
3,234,994	-				+0.1
3,235,140	-		Shew_2738	0.36	+0.2
3,235,223	+		Shew_2738	0.55	+0.8
3,235,223	+		Shew_2738	0.55	+0.1
3,235,255	-		Shew_2738	0.62	-1.2
3,235,282	-		Shew_2738	0.68	+0.2
3,235,380	+				-0.9
3,235,475	-				+0.2
3,235,673	-				+0.8
3,235,796	-				-0.1
3,235,986	-		Shew_2739	0.12	+0.2
3,236,212	+		Shew_2739	0.28	-0.6
3,236,310	-		Shew_2739	0.35	+0.5
3,236,484	+		Shew_2739	0.47	-0.2
3,236,961	+		Shew_2739	0.81	-0.0
3,237,043	-		Shew_2739	0.86	-0.1
3,237,577	-				-0.0
3,237,738	+				+0.8
3,237,755	+				+0.8
3,237,763	-				+1.9
3,238,064	-		Shew_2740	0.49	-1.8