Strain Fitness in Shewanella loihica PV-4 around Shew_2228

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
2,602,939	+		Shew_2227	0.44	+0.3
2,602,939	+		Shew_2227	0.44	+0.2
2,602,947	-		Shew_2227	0.45	+2.9
2,602,947	-		Shew_2227	0.45	+0.7
2,602,947	-		Shew_2227	0.45	+0.4
2,602,947	-		Shew_2227	0.45	+0.8
2,602,998	+		Shew_2227	0.48	+1.4
2,603,010	+		Shew_2227	0.49	+0.4
2,603,097	-		Shew_2227	0.56	+0.9
2,603,190	-		Shew_2227	0.63	-0.1
2,603,225	+		Shew_2227	0.66	-0.2
2,603,227	+		Shew_2227	0.66	+1.1
2,603,235	-		Shew_2227	0.66	+0.2
2,603,330	-		Shew_2227	0.74	+1.4
2,603,399	-		Shew_2227	0.79	+2.3
2,603,501	+		Shew_2227	0.87	-2.0
2,603,523	-		Shew_2227	0.88	+1.8
2,603,654	+				+0.6
2,603,796	-				+1.7
2,604,242	-		Shew_2228	0.33	+0.2
2,604,254	-		Shew_2228	0.34	+0.8
2,604,267	+		Shew_2228	0.35	+0.1
2,604,481	-		Shew_2228	0.51	+1.1
2,604,571	-		Shew_2228	0.58	-0.1
2,604,731	-		Shew_2228	0.70	-0.3
2,604,836	-		Shew_2228	0.78	+0.8
2,604,868	+		Shew_2228	0.81	+0.8
2,605,122	-				-0.7
2,605,180	-				-0.4
2,605,180	-				+0.8
2,605,189	-				-0.9
2,605,221	-				-0.3
2,605,578	-		Shew_2229	0.26	-4.3