Strain Fitness in Shewanella loihica PV-4 around Shew_2160

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
2,506,376	-		Shew_2159	0.86	-0.8
2,506,518	+				+1.0
2,507,370	+		Shew_2160	0.37	-0.0
2,507,614	-		Shew_2160	0.51	+0.6
2,507,873	+		Shew_2160	0.66	-0.7
2,508,154	+		Shew_2160	0.82	+2.1
2,508,179	+		Shew_2160	0.84	+1.4
2,508,179	+		Shew_2160	0.84	-0.5
2,508,195	-		Shew_2160	0.85	-0.1
2,508,328	+				-0.4
2,508,417	-				-0.2
2,508,611	-				+0.8
2,508,734	-				+1.3
2,508,948	-		Shew_2161	0.10	-3.1
2,509,069	-		Shew_2161	0.16	+0.7
2,509,082	+		Shew_2161	0.17	+0.1
2,509,208	-		Shew_2161	0.22	-0.7
2,509,218	-		Shew_2161	0.23	+0.6
2,509,308	-		Shew_2161	0.27	-0.3
2,509,431	+		Shew_2161	0.33	-0.5