Strain Fitness in Shewanella loihica PV-4 around Shew_1961
Experiment: Cephalothin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,264,915 | - | +1.2 | |||
2,265,246 | - | Shew_1960 | 0.68 | -0.0 | |
2,265,783 | + | Shew_1961 | 0.12 | +0.6 | |
2,266,095 | + | Shew_1961 | 0.29 | +2.0 | |
2,266,496 | - | Shew_1961 | 0.52 | +0.6 | |
2,267,254 | + | +1.2 | |||
2,267,262 | - | +0.9 | |||
2,267,897 | - | Shew_1962 | 0.28 | +0.6 | |
2,267,978 | + | Shew_1962 | 0.33 | -0.2 |
Or see this region's nucleotide sequence