Strain Fitness in Shewanella loihica PV-4 around Shew_1910
Experiment: Cephalothin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,206,217 | - | +0.3 | |||
2,206,321 | + | +0.1 | |||
2,206,324 | - | +0.1 | |||
2,206,329 | - | +0.7 | |||
2,206,389 | + | -0.0 | |||
2,207,506 | - | Shew_1910 | 0.41 | +1.1 | |
2,208,130 | - | Shew_1910 | 0.65 | -0.9 | |
2,208,735 | + | Shew_1910 | 0.88 | -0.1 | |
2,208,852 | - | +0.3 | |||
2,209,300 | + | -0.2 | |||
2,209,307 | + | +0.3 |
Or see this region's nucleotide sequence