Strain Fitness in Shewanella loihica PV-4 around Shew_1462

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
1,683,513	+				-0.7
1,683,519	+		Shew_1461	0.10	+1.3
1,683,519	+		Shew_1461	0.10	-0.2
1,683,967	-		Shew_1461	0.56	-0.7
1,683,967	-		Shew_1461	0.56	-1.0
1,684,350	+				+0.2
1,684,689	+		Shew_1462	0.34	-0.3
1,684,725	+		Shew_1462	0.40	-0.5
1,684,755	+		Shew_1462	0.44	+0.0
1,684,763	-		Shew_1462	0.45	-0.8
1,684,934	-		Shew_1462	0.72	-0.5
1,685,053	+				+0.1
1,685,330	-		Shew_1463	0.10	-1.6
1,685,674	-		Shew_1463	0.51	-0.1
1,685,721	+		Shew_1463	0.57	-0.3
1,685,721	+		Shew_1463	0.57	-2.3
1,685,729	-		Shew_1463	0.58	+0.1