Strain Fitness in Shewanella loihica PV-4 around Shew_1196

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
1,386,792	+		Shew_1195	0.76	+0.7
1,387,701	-		Shew_1196	0.25	-2.3
1,388,073	+		Shew_1196	0.47	+1.2
1,388,082	-		Shew_1196	0.48	-2.9
1,388,102	-		Shew_1196	0.49	-1.2
1,388,150	+		Shew_1196	0.52	-2.8
1,388,205	-		Shew_1196	0.55	-0.4
1,388,282	-		Shew_1196	0.60	-4.4
1,388,287	-		Shew_1196	0.60	-1.2
1,388,287	-		Shew_1196	0.60	-1.6
1,388,337	+		Shew_1196	0.63	-3.5
1,388,718	+		Shew_1196	0.86	-3.1
1,389,169	-				-0.5
1,389,298	+		Shew_1197	0.20	+1.2
1,389,306	-		Shew_1197	0.21	-0.0
1,389,306	-		Shew_1197	0.21	-1.2
1,389,306	-		Shew_1197	0.21	-0.6
1,389,306	-		Shew_1197	0.21	-0.0
1,389,355	+		Shew_1197	0.26	+0.3
1,389,355	+		Shew_1197	0.26	+0.2
1,389,355	+		Shew_1197	0.26	+0.2
1,389,420	+		Shew_1197	0.33	-0.6
1,389,425	+		Shew_1197	0.33	-0.0
1,389,514	-		Shew_1197	0.43	+0.9
1,389,623	-		Shew_1197	0.54	+0.1
1,389,828	+		Shew_1197	0.75	+1.3