Strain Fitness in Shewanella loihica PV-4 around Shew_0988

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
1,140,826	-		Shew_0987	0.54	-3.3
1,140,832	+		Shew_0987	0.54	+0.5
1,141,298	-				-0.3
1,141,329	+				+0.2
1,141,688	-				-0.5
1,142,018	-		Shew_0988	0.11	+0.4
1,142,060	+		Shew_0988	0.13	-0.4
1,142,068	-		Shew_0988	0.13	+0.8
1,142,451	+		Shew_0988	0.30	+0.4
1,142,537	-		Shew_0988	0.33	-0.5
1,142,652	-		Shew_0988	0.38	-0.2
1,142,694	+		Shew_0988	0.40	+1.3
1,142,694	+		Shew_0988	0.40	+0.1
1,142,702	-		Shew_0988	0.41	+0.7
1,142,714	-		Shew_0988	0.41	+0.3
1,142,966	+		Shew_0988	0.52	-0.4
1,143,049	-		Shew_0988	0.56	-0.4
1,143,096	-		Shew_0988	0.58	+0.2
1,143,595	+		Shew_0988	0.79	-0.1
1,143,595	+		Shew_0988	0.79	+0.7
1,143,595	+		Shew_0988	0.79	-0.0
1,143,603	-		Shew_0988	0.80	+0.7
1,143,603	-		Shew_0988	0.80	+0.5
1,143,690	+		Shew_0988	0.83	+0.1
1,143,698	-		Shew_0988	0.84	+0.2
1,144,045	-				+0.4
1,144,278	+				+0.9
1,144,278	+				+0.2
1,144,278	+				-0.6
1,144,343	-				-1.0
1,144,544	-				+0.3
1,144,544	+				-0.5
1,144,552	-				+0.2
1,144,552	-				+0.5
1,144,579	+				+1.5
1,144,595	+				+0.4
1,144,597	-				+0.2
1,144,653	+				+0.3
1,144,661	-				+0.2
1,144,852	+				-0.1
1,144,918	+				-1.0
1,144,923	+				+0.0
1,144,926	-				-0.0
1,144,939	-				+0.2
1,145,071	+		Shew_0989	0.15	+0.8