Strain Fitness in Shewanella loihica PV-4 around Shew_0899

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
1,018,275	+		Shew_0898	0.27	-0.0
1,018,662	-		Shew_0898	0.68	+0.7
1,018,750	+		Shew_0898	0.77	-0.7
1,018,773	-		Shew_0898	0.80	-0.3
1,018,783	-		Shew_0898	0.81	-0.4
1,018,839	-		Shew_0898	0.87	-0.2
1,018,853	+		Shew_0898	0.88	-0.2
1,018,909	+				-0.3
1,019,150	-				+0.3
1,019,155	+				+0.9
1,019,155	+				-0.4
1,019,232	+		Shew_0899	0.18	+0.3
1,019,419	-		Shew_0899	0.40	+0.3
1,019,518	-		Shew_0899	0.52	+0.6
1,019,571	-		Shew_0899	0.59	+0.6
1,019,750	+		Shew_0899	0.80	+0.4
1,020,190	+				+0.5
1,020,198	-				+1.4
1,020,198	-				+0.5
1,020,324	-		Shew_0900	0.19	+0.2
1,020,347	+		Shew_0900	0.20	-1.3
1,020,683	+		Shew_0900	0.49	+1.2
1,020,703	+		Shew_0900	0.51	+0.1
1,020,812	-		Shew_0900	0.60	+0.4
1,020,818	+		Shew_0900	0.61	-1.9