Strain Fitness in Shewanella loihica PV-4 around Shew_0302

Experiment: Cephalothin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.1 mg/ml
323,139	+		Shew_0300	0.87	-0.6
323,177	+				+0.2
323,180	-				+0.2
323,220	+				-0.7
323,334	-				-0.1
323,334	-				+0.6
323,510	+				+0.1
323,587	+				+0.2
323,592	-				-2.2
323,632	-		Shew_0301	0.17	+1.1
324,066	+				+0.5
324,244	+		Shew_0302	0.16	+1.3
324,271	+		Shew_0302	0.19	-0.0
324,295	+		Shew_0302	0.22	+0.1
324,334	-		Shew_0302	0.27	+0.1
324,603	+		Shew_0302	0.62	-0.2
324,713	+		Shew_0302	0.77	+0.4
324,721	-		Shew_0302	0.78	+1.1
324,744	-		Shew_0302	0.81	+0.3
324,839	+				-1.8
324,947	-				+0.2
325,019	-				-2.5
325,086	-				-0.0
325,449	+		Shew_0303	0.33	-0.1
325,449	+		Shew_0303	0.33	+0.3
325,492	+		Shew_0303	0.37	-0.1
325,640	-		Shew_0303	0.47	-0.3
325,663	+		Shew_0303	0.49	+0.0
325,666	-		Shew_0303	0.49	+0.4
325,791	-		Shew_0303	0.59	+0.5