Experiment: Cephalothin 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0088 and moaC overlap by 8 nucleotides moaC and Shew_0090 are separated by 49 nucleotides Shew_0090 and Shew_0091 are separated by 1 nucleotides Shew_0091 and Shew_0092 are separated by 33 nucleotides Shew_0092 and Shew_0093 overlap by 1 nucleotides
Shew_0088: Shew_0088 - molybdenum cofactor biosynthesis protein B (RefSeq), at 102,681 to 103,211
_0088
Shew_0089: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 103,204 to 103,680
moaC
Shew_0090: Shew_0090 - molybdopterin converting factor, subunit 1 (RefSeq), at 103,730 to 103,981
_0090
Shew_0091: Shew_0091 - molybdopterin biosynthesis MoaE (RefSeq), at 103,983 to 104,450
_0091
Shew_0092: Shew_0092 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 104,484 to 105,308
_0092
Shew_0093: Shew_0093 - molybdate ABC transporter, inner membrane subunit (RefSeq), at 105,308 to 105,988
_0093
Position (kb) 103
104
105 Strain fitness (log2 ratio) -2
-1
0
1 at 103.015 kb on + strand, within Shew_0088 at 103.023 kb on - strand, within Shew_0088 at 103.038 kb on + strand, within Shew_0088 at 103.143 kb on + strand, within Shew_0088 at 103.172 kb on - strand at 103.601 kb on - strand, within moaC at 104.069 kb on - strand, within Shew_0091 at 104.211 kb on + strand, within Shew_0091 at 104.219 kb on - strand, within Shew_0091 at 104.505 kb on + strand at 104.513 kb on - strand at 104.535 kb on + strand at 104.538 kb on - strand at 104.863 kb on + strand, within Shew_0092 at 105.010 kb on - strand, within Shew_0092 at 105.010 kb on - strand, within Shew_0092 at 105.105 kb on + strand, within Shew_0092 at 105.356 kb on - strand at 105.424 kb on + strand, within Shew_0093 at 105.442 kb on + strand, within Shew_0093
Per-strain Table
Position Strand Gene LocusTag Fraction Cephalothin 0.1 mg/ml remove 103,015 + Shew_0088 0.63 +0.5 103,023 - Shew_0088 0.64 +0.9 103,038 + Shew_0088 0.67 -0.2 103,143 + Shew_0088 0.87 -0.4 103,172 - +0.3 103,601 - moaC Shew_0089 0.83 -1.0 104,069 - Shew_0091 0.18 +0.7 104,211 + Shew_0091 0.49 +0.4 104,219 - Shew_0091 0.50 +1.6 104,505 + +0.1 104,513 - -0.7 104,535 + +0.1 104,538 - -0.1 104,863 + Shew_0092 0.46 -1.2 105,010 - Shew_0092 0.64 -0.1 105,010 - Shew_0092 0.64 -0.1 105,105 + Shew_0092 0.75 +0.1 105,356 - -2.3 105,424 + Shew_0093 0.17 +0.8 105,442 + Shew_0093 0.20 -0.7
Or see this region's nucleotide sequence