Experiment: L-Glutamine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4093 and HP15_4094 overlap by 21 nucleotides HP15_4094 and HP15_4095 are separated by 248 nucleotides
HP15_4093: HP15_4093 - membrane protein containing diguanylate cyclase, predicted domains, at 4,327,236 to 4,328,426
_4093
HP15_4094: HP15_4094 - enoyl-CoA hydratase/isomerase, at 4,328,406 to 4,329,200
_4094
HP15_4095: HP15_4095 - branched-chain amino acid ABC transporter, ATP-binding protein, at 4,329,449 to 4,330,264
_4095
Position (kb)
4328
4329
4330 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4327.447 kb on - strand, within HP15_4093 at 4327.500 kb on - strand, within HP15_4093 at 4327.500 kb on - strand, within HP15_4093 at 4327.506 kb on + strand, within HP15_4093 at 4327.593 kb on + strand, within HP15_4093 at 4327.651 kb on - strand, within HP15_4093 at 4327.735 kb on - strand, within HP15_4093 at 4327.878 kb on + strand, within HP15_4093 at 4327.901 kb on - strand, within HP15_4093 at 4327.906 kb on - strand, within HP15_4093 at 4327.935 kb on - strand, within HP15_4093 at 4327.988 kb on + strand, within HP15_4093 at 4328.198 kb on + strand, within HP15_4093 at 4328.228 kb on + strand, within HP15_4093 at 4328.307 kb on - strand, within HP15_4093 at 4328.327 kb on - strand at 4328.331 kb on - strand at 4328.506 kb on + strand, within HP15_4094 at 4328.506 kb on + strand, within HP15_4094 at 4328.514 kb on - strand, within HP15_4094 at 4328.514 kb on - strand, within HP15_4094 at 4328.541 kb on - strand, within HP15_4094 at 4328.552 kb on - strand, within HP15_4094 at 4328.579 kb on - strand, within HP15_4094 at 4328.579 kb on - strand, within HP15_4094 at 4328.585 kb on - strand, within HP15_4094 at 4328.771 kb on - strand, within HP15_4094 at 4328.847 kb on + strand, within HP15_4094 at 4328.848 kb on - strand, within HP15_4094 at 4328.848 kb on - strand, within HP15_4094 at 4328.872 kb on + strand, within HP15_4094 at 4328.872 kb on + strand, within HP15_4094 at 4328.945 kb on - strand, within HP15_4094 at 4328.977 kb on - strand, within HP15_4094 at 4328.999 kb on - strand, within HP15_4094 at 4329.038 kb on - strand, within HP15_4094 at 4329.117 kb on + strand, within HP15_4094 at 4329.117 kb on + strand, within HP15_4094 at 4329.244 kb on - strand at 4329.286 kb on - strand at 4329.433 kb on - strand at 4329.619 kb on - strand, within HP15_4095 at 4329.638 kb on + strand, within HP15_4095 at 4329.657 kb on + strand, within HP15_4095 at 4329.660 kb on - strand, within HP15_4095 at 4329.680 kb on + strand, within HP15_4095 at 4329.680 kb on + strand, within HP15_4095 at 4329.689 kb on - strand, within HP15_4095 at 4329.718 kb on + strand, within HP15_4095 at 4329.718 kb on + strand, within HP15_4095 at 4329.726 kb on - strand, within HP15_4095 at 4329.744 kb on + strand, within HP15_4095 at 4329.752 kb on - strand, within HP15_4095 at 4329.752 kb on - strand, within HP15_4095 at 4329.752 kb on - strand, within HP15_4095 at 4329.775 kb on - strand, within HP15_4095 at 4329.784 kb on + strand, within HP15_4095 at 4329.789 kb on + strand, within HP15_4095 at 4329.792 kb on - strand, within HP15_4095 at 4329.851 kb on - strand, within HP15_4095 at 4329.920 kb on + strand, within HP15_4095 at 4329.931 kb on + strand, within HP15_4095 at 4330.060 kb on - strand, within HP15_4095 at 4330.084 kb on + strand, within HP15_4095 at 4330.090 kb on + strand, within HP15_4095 at 4330.126 kb on + strand, within HP15_4095 at 4330.177 kb on - strand, within HP15_4095 at 4330.177 kb on - strand, within HP15_4095 at 4330.179 kb on + strand, within HP15_4095 at 4330.187 kb on - strand at 4330.194 kb on + strand at 4330.195 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine as (N) remove 4,327,447 - HP15_4093 0.18 -0.6 4,327,500 - HP15_4093 0.22 +0.4 4,327,500 - HP15_4093 0.22 +0.0 4,327,506 + HP15_4093 0.23 -0.2 4,327,593 + HP15_4093 0.30 +0.4 4,327,651 - HP15_4093 0.35 -0.3 4,327,735 - HP15_4093 0.42 +0.1 4,327,878 + HP15_4093 0.54 +0.6 4,327,901 - HP15_4093 0.56 +1.1 4,327,906 - HP15_4093 0.56 -0.4 4,327,935 - HP15_4093 0.59 +0.0 4,327,988 + HP15_4093 0.63 -0.1 4,328,198 + HP15_4093 0.81 -0.8 4,328,228 + HP15_4093 0.83 +0.2 4,328,307 - HP15_4093 0.90 +0.9 4,328,327 - -0.2 4,328,331 - -0.2 4,328,506 + HP15_4094 0.13 +0.5 4,328,506 + HP15_4094 0.13 +0.2 4,328,514 - HP15_4094 0.14 -0.2 4,328,514 - HP15_4094 0.14 -0.4 4,328,541 - HP15_4094 0.17 -0.3 4,328,552 - HP15_4094 0.18 -0.7 4,328,579 - HP15_4094 0.22 +0.4 4,328,579 - HP15_4094 0.22 -1.1 4,328,585 - HP15_4094 0.23 +0.0 4,328,771 - HP15_4094 0.46 -2.9 4,328,847 + HP15_4094 0.55 -0.9 4,328,848 - HP15_4094 0.56 -1.1 4,328,848 - HP15_4094 0.56 +0.3 4,328,872 + HP15_4094 0.59 +0.0 4,328,872 + HP15_4094 0.59 +0.5 4,328,945 - HP15_4094 0.68 -0.5 4,328,977 - HP15_4094 0.72 +0.2 4,328,999 - HP15_4094 0.75 +0.9 4,329,038 - HP15_4094 0.79 -0.1 4,329,117 + HP15_4094 0.89 -0.7 4,329,117 + HP15_4094 0.89 +1.4 4,329,244 - +0.8 4,329,286 - +1.1 4,329,433 - -0.8 4,329,619 - HP15_4095 0.21 +0.6 4,329,638 + HP15_4095 0.23 +1.0 4,329,657 + HP15_4095 0.25 -0.2 4,329,660 - HP15_4095 0.26 +1.3 4,329,680 + HP15_4095 0.28 -0.1 4,329,680 + HP15_4095 0.28 -0.9 4,329,689 - HP15_4095 0.29 -1.1 4,329,718 + HP15_4095 0.33 -0.5 4,329,718 + HP15_4095 0.33 +0.7 4,329,726 - HP15_4095 0.34 -0.2 4,329,744 + HP15_4095 0.36 +1.5 4,329,752 - HP15_4095 0.37 -0.1 4,329,752 - HP15_4095 0.37 +0.3 4,329,752 - HP15_4095 0.37 -0.6 4,329,775 - HP15_4095 0.40 +0.4 4,329,784 + HP15_4095 0.41 +0.3 4,329,789 + HP15_4095 0.42 -0.5 4,329,792 - HP15_4095 0.42 -0.3 4,329,851 - HP15_4095 0.49 -1.8 4,329,920 + HP15_4095 0.58 -0.5 4,329,931 + HP15_4095 0.59 -0.7 4,330,060 - HP15_4095 0.75 +0.7 4,330,084 + HP15_4095 0.78 +0.3 4,330,090 + HP15_4095 0.79 -0.3 4,330,126 + HP15_4095 0.83 -0.0 4,330,177 - HP15_4095 0.89 -0.3 4,330,177 - HP15_4095 0.89 +0.9 4,330,179 + HP15_4095 0.89 +2.8 4,330,187 - -0.2 4,330,194 + +1.0 4,330,195 + +0.1
Or see this region's nucleotide sequence