Strain Fitness in Marinobacter adhaerens HP15 around HP15_2483

Experiment: L-Glutamine as (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2481 and HP15_2482 are separated by 51 nucleotidesHP15_2482 and HP15_2483 are separated by 22 nucleotidesHP15_2483 and HP15_2484 overlap by 4 nucleotidesHP15_2484 and HP15_2485 are separated by 26 nucleotides HP15_2481: HP15_2481 - protein of unknown function domain protein, at 2,622,759 to 2,623,004 _2481 HP15_2482: HP15_2482 - dethiobiotin synthetase, at 2,623,056 to 2,623,748 _2482 HP15_2483: HP15_2483 - protein containing methyltransferase type 11 domain, at 2,623,771 to 2,624,592 _2483 HP15_2484: HP15_2484 - biotin biosynthesis protein BioH, at 2,624,589 to 2,625,314 _2484 HP15_2485: HP15_2485 - 8-amino-7-oxononanoate synthase, at 2,625,341 to 2,626,516 _2485 Position (kb) 2623 2624 2625Strain fitness (log2 ratio) -1 0 1at 2623.052 kb on - strandat 2623.141 kb on - strand, within HP15_2482at 2623.191 kb on + strand, within HP15_2482at 2623.272 kb on - strand, within HP15_2482at 2623.272 kb on - strand, within HP15_2482at 2623.393 kb on + strand, within HP15_2482at 2623.459 kb on + strand, within HP15_2482at 2623.467 kb on - strand, within HP15_2482at 2623.475 kb on - strand, within HP15_2482at 2623.563 kb on - strand, within HP15_2482at 2623.571 kb on + strand, within HP15_2482at 2623.579 kb on - strand, within HP15_2482at 2623.579 kb on - strand, within HP15_2482at 2623.662 kb on - strand, within HP15_2482at 2623.776 kb on - strandat 2623.784 kb on - strandat 2623.807 kb on - strandat 2623.807 kb on - strandat 2623.896 kb on - strand, within HP15_2483at 2623.911 kb on - strand, within HP15_2483at 2624.110 kb on + strand, within HP15_2483at 2624.110 kb on + strand, within HP15_2483at 2624.110 kb on + strand, within HP15_2483at 2624.185 kb on - strand, within HP15_2483at 2624.276 kb on - strand, within HP15_2483at 2624.405 kb on - strand, within HP15_2483at 2624.425 kb on + strand, within HP15_2483at 2624.484 kb on + strand, within HP15_2483at 2624.530 kb on + strandat 2624.532 kb on - strandat 2624.587 kb on + strandat 2624.666 kb on + strand, within HP15_2484at 2624.771 kb on + strand, within HP15_2484at 2624.852 kb on + strand, within HP15_2484at 2624.896 kb on - strand, within HP15_2484at 2624.923 kb on + strand, within HP15_2484at 2624.964 kb on - strand, within HP15_2484at 2624.972 kb on - strand, within HP15_2484at 2625.066 kb on + strand, within HP15_2484at 2625.073 kb on + strand, within HP15_2484at 2625.073 kb on + strand, within HP15_2484at 2625.081 kb on - strand, within HP15_2484at 2625.090 kb on + strand, within HP15_2484at 2625.163 kb on - strand, within HP15_2484at 2625.166 kb on + strand, within HP15_2484at 2625.174 kb on - strand, within HP15_2484at 2625.429 kb on + strandat 2625.494 kb on - strand, within HP15_2485at 2625.508 kb on + strand, within HP15_2485

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine as (N)
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2,623,052 - -0.2
2,623,141 - HP15_2482 0.12 -0.5
2,623,191 + HP15_2482 0.19 +0.6
2,623,272 - HP15_2482 0.31 +1.1
2,623,272 - HP15_2482 0.31 -0.0
2,623,393 + HP15_2482 0.49 -0.2
2,623,459 + HP15_2482 0.58 -0.2
2,623,467 - HP15_2482 0.59 +0.0
2,623,475 - HP15_2482 0.60 +0.3
2,623,563 - HP15_2482 0.73 -0.5
2,623,571 + HP15_2482 0.74 -1.7
2,623,579 - HP15_2482 0.75 +0.4
2,623,579 - HP15_2482 0.75 -0.7
2,623,662 - HP15_2482 0.87 -0.1
2,623,776 - -0.2
2,623,784 - +0.0
2,623,807 - +0.1
2,623,807 - +0.7
2,623,896 - HP15_2483 0.15 +0.1
2,623,911 - HP15_2483 0.17 +0.7
2,624,110 + HP15_2483 0.41 -1.2
2,624,110 + HP15_2483 0.41 -0.6
2,624,110 + HP15_2483 0.41 -1.4
2,624,185 - HP15_2483 0.50 -0.5
2,624,276 - HP15_2483 0.61 +1.1
2,624,405 - HP15_2483 0.77 +0.7
2,624,425 + HP15_2483 0.80 -0.9
2,624,484 + HP15_2483 0.87 -0.7
2,624,530 + +0.3
2,624,532 - -1.4
2,624,587 + -0.4
2,624,666 + HP15_2484 0.11 -1.2
2,624,771 + HP15_2484 0.25 -0.4
2,624,852 + HP15_2484 0.36 +0.6
2,624,896 - HP15_2484 0.42 +0.9
2,624,923 + HP15_2484 0.46 +1.0
2,624,964 - HP15_2484 0.52 -0.4
2,624,972 - HP15_2484 0.53 +0.5
2,625,066 + HP15_2484 0.66 -0.6
2,625,073 + HP15_2484 0.67 -0.7
2,625,073 + HP15_2484 0.67 +0.2
2,625,081 - HP15_2484 0.68 +1.4
2,625,090 + HP15_2484 0.69 +0.7
2,625,163 - HP15_2484 0.79 -1.0
2,625,166 + HP15_2484 0.79 +0.7
2,625,174 - HP15_2484 0.81 -0.3
2,625,429 + -0.2
2,625,494 - HP15_2485 0.13 +0.4
2,625,508 + HP15_2485 0.14 -0.8

Or see this region's nucleotide sequence