Experiment: L-Glutamine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1593 and HP15_1594 are separated by 91 nucleotides HP15_1594 and HP15_1595 overlap by 8 nucleotides HP15_1595 and HP15_1596 are separated by 463 nucleotides
HP15_1593: HP15_1593 - patatin-like phospholipase domain-containing protein, at 1,687,088 to 1,688,560
_1593
HP15_1594: HP15_1594 - hypothetical protein, at 1,688,652 to 1,690,559
_1594
HP15_1595: HP15_1595 - hypothetical protein, at 1,690,552 to 1,690,821
_1595
HP15_1596: HP15_1596 - D-amino acid dehydrogenase 2 small subunit, at 1,691,285 to 1,692,505
_1596
Position (kb)
1688
1689
1690
1691 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1687.759 kb on + strand, within HP15_1593 at 1687.807 kb on + strand, within HP15_1593 at 1687.873 kb on + strand, within HP15_1593 at 1687.880 kb on + strand, within HP15_1593 at 1688.070 kb on - strand, within HP15_1593 at 1688.098 kb on + strand, within HP15_1593 at 1688.101 kb on + strand, within HP15_1593 at 1688.122 kb on - strand, within HP15_1593 at 1688.434 kb on + strand at 1688.456 kb on + strand at 1688.489 kb on - strand at 1688.541 kb on - strand at 1688.633 kb on + strand at 1688.763 kb on + strand at 1688.841 kb on + strand at 1688.860 kb on - strand, within HP15_1594 at 1688.860 kb on - strand, within HP15_1594 at 1688.881 kb on - strand, within HP15_1594 at 1688.907 kb on - strand, within HP15_1594 at 1688.961 kb on + strand, within HP15_1594 at 1689.099 kb on + strand, within HP15_1594 at 1689.099 kb on + strand, within HP15_1594 at 1689.099 kb on + strand, within HP15_1594 at 1689.107 kb on - strand, within HP15_1594 at 1689.107 kb on - strand, within HP15_1594 at 1689.107 kb on - strand, within HP15_1594 at 1689.107 kb on - strand, within HP15_1594 at 1689.275 kb on + strand, within HP15_1594 at 1689.524 kb on - strand, within HP15_1594 at 1689.526 kb on + strand, within HP15_1594 at 1689.621 kb on + strand, within HP15_1594 at 1689.815 kb on - strand, within HP15_1594 at 1689.819 kb on + strand, within HP15_1594 at 1689.819 kb on + strand, within HP15_1594 at 1689.889 kb on + strand, within HP15_1594 at 1689.934 kb on + strand, within HP15_1594 at 1689.962 kb on + strand, within HP15_1594 at 1689.962 kb on + strand, within HP15_1594 at 1690.020 kb on + strand, within HP15_1594 at 1690.051 kb on + strand, within HP15_1594 at 1690.063 kb on + strand, within HP15_1594 at 1690.068 kb on + strand, within HP15_1594 at 1690.071 kb on - strand, within HP15_1594 at 1690.071 kb on - strand, within HP15_1594 at 1690.076 kb on - strand, within HP15_1594 at 1690.097 kb on - strand, within HP15_1594 at 1690.104 kb on + strand, within HP15_1594 at 1690.251 kb on - strand, within HP15_1594 at 1690.309 kb on - strand, within HP15_1594 at 1690.389 kb on + strand at 1690.452 kb on - strand at 1690.454 kb on - strand at 1690.523 kb on + strand at 1690.639 kb on + strand, within HP15_1595 at 1690.822 kb on - strand at 1690.903 kb on - strand at 1690.994 kb on + strand at 1690.994 kb on + strand at 1690.994 kb on + strand at 1690.994 kb on + strand at 1691.002 kb on - strand at 1691.002 kb on - strand at 1691.002 kb on - strand at 1691.099 kb on + strand at 1691.208 kb on + strand at 1691.312 kb on + strand at 1691.333 kb on + strand at 1691.333 kb on + strand at 1691.341 kb on - strand at 1691.355 kb on + strand at 1691.404 kb on - strand at 1691.446 kb on + strand, within HP15_1596 at 1691.478 kb on - strand, within HP15_1596 at 1691.528 kb on - strand, within HP15_1596
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine as (N) remove 1,687,759 + HP15_1593 0.46 +0.8 1,687,807 + HP15_1593 0.49 +0.7 1,687,873 + HP15_1593 0.53 +0.7 1,687,880 + HP15_1593 0.54 +0.5 1,688,070 - HP15_1593 0.67 -0.3 1,688,098 + HP15_1593 0.69 -0.2 1,688,101 + HP15_1593 0.69 -0.4 1,688,122 - HP15_1593 0.70 -0.6 1,688,434 + -0.2 1,688,456 + +0.0 1,688,489 - +2.1 1,688,541 - -0.8 1,688,633 + -0.7 1,688,763 + +0.1 1,688,841 + +0.3 1,688,860 - HP15_1594 0.11 -0.3 1,688,860 - HP15_1594 0.11 -0.2 1,688,881 - HP15_1594 0.12 +0.0 1,688,907 - HP15_1594 0.13 -0.4 1,688,961 + HP15_1594 0.16 +0.6 1,689,099 + HP15_1594 0.23 -0.3 1,689,099 + HP15_1594 0.23 +0.1 1,689,099 + HP15_1594 0.23 -0.2 1,689,107 - HP15_1594 0.24 +0.2 1,689,107 - HP15_1594 0.24 -0.3 1,689,107 - HP15_1594 0.24 +0.4 1,689,107 - HP15_1594 0.24 -1.5 1,689,275 + HP15_1594 0.33 -0.2 1,689,524 - HP15_1594 0.46 -0.5 1,689,526 + HP15_1594 0.46 -1.2 1,689,621 + HP15_1594 0.51 -0.4 1,689,815 - HP15_1594 0.61 +1.1 1,689,819 + HP15_1594 0.61 +0.7 1,689,819 + HP15_1594 0.61 -0.7 1,689,889 + HP15_1594 0.65 +0.7 1,689,934 + HP15_1594 0.67 -0.5 1,689,962 + HP15_1594 0.69 +0.5 1,689,962 + HP15_1594 0.69 -1.0 1,690,020 + HP15_1594 0.72 +0.2 1,690,051 + HP15_1594 0.73 +0.7 1,690,063 + HP15_1594 0.74 +0.5 1,690,068 + HP15_1594 0.74 +0.6 1,690,071 - HP15_1594 0.74 -0.4 1,690,071 - HP15_1594 0.74 +2.2 1,690,076 - HP15_1594 0.75 -0.2 1,690,097 - HP15_1594 0.76 -0.1 1,690,104 + HP15_1594 0.76 -0.2 1,690,251 - HP15_1594 0.84 +1.2 1,690,309 - HP15_1594 0.87 +0.0 1,690,389 + -0.5 1,690,452 - -0.4 1,690,454 - +1.1 1,690,523 + +0.2 1,690,639 + HP15_1595 0.32 -0.5 1,690,822 - +0.6 1,690,903 - -0.2 1,690,994 + -0.1 1,690,994 + -0.8 1,690,994 + +0.4 1,690,994 + -1.0 1,691,002 - -1.7 1,691,002 - -1.1 1,691,002 - -1.1 1,691,099 + -0.8 1,691,208 + -0.5 1,691,312 + -0.3 1,691,333 + -0.1 1,691,333 + -2.5 1,691,341 - -1.7 1,691,355 + -0.0 1,691,404 - +0.2 1,691,446 + HP15_1596 0.13 -2.0 1,691,478 - HP15_1596 0.16 -1.7 1,691,528 - HP15_1596 0.20 +0.2
Or see this region's nucleotide sequence