Experiment: L-Glutamine as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1259 and HP15_1260 are separated by 49 nucleotides HP15_1260 and HP15_1261 overlap by 4 nucleotides HP15_1261 and HP15_1262 overlap by 4 nucleotides HP15_1262 and HP15_1263 are separated by 36 nucleotides
HP15_1259: HP15_1259 - xanthine dehydrogenase accessory factor, at 1,319,445 to 1,320,380
_1259
HP15_1260: HP15_1260 - sugar aldolase, at 1,320,430 to 1,321,056
_1260
HP15_1261: HP15_1261 - acireductone dioxygenase, ARD, at 1,321,053 to 1,321,613
_1261
HP15_1262: HP15_1262 - 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, at 1,321,610 to 1,322,302
_1262
HP15_1263: HP15_1263 - conserved hypothetical protein, at 1,322,339 to 1,323,394
_1263
Position (kb)
1321
1322 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1320.085 kb on - strand, within HP15_1259 at 1320.112 kb on + strand, within HP15_1259 at 1320.112 kb on + strand, within HP15_1259 at 1320.141 kb on - strand, within HP15_1259 at 1320.158 kb on + strand, within HP15_1259 at 1320.158 kb on + strand, within HP15_1259 at 1320.361 kb on + strand at 1320.369 kb on - strand at 1320.397 kb on + strand at 1320.591 kb on + strand, within HP15_1260 at 1320.599 kb on - strand, within HP15_1260 at 1320.695 kb on - strand, within HP15_1260 at 1320.695 kb on - strand, within HP15_1260 at 1320.706 kb on - strand, within HP15_1260 at 1320.715 kb on + strand, within HP15_1260 at 1320.791 kb on + strand, within HP15_1260 at 1320.791 kb on + strand, within HP15_1260 at 1320.955 kb on + strand, within HP15_1260 at 1320.963 kb on - strand, within HP15_1260 at 1320.997 kb on + strand at 1321.054 kb on + strand at 1321.054 kb on + strand at 1321.106 kb on - strand at 1321.217 kb on + strand, within HP15_1261 at 1321.474 kb on + strand, within HP15_1261 at 1321.474 kb on + strand, within HP15_1261 at 1321.595 kb on + strand at 1322.160 kb on - strand, within HP15_1262 at 1322.277 kb on + strand at 1322.523 kb on + strand, within HP15_1263 at 1322.543 kb on + strand, within HP15_1263
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine as (N) remove 1,320,085 - HP15_1259 0.68 -1.3 1,320,112 + HP15_1259 0.71 -0.1 1,320,112 + HP15_1259 0.71 -0.3 1,320,141 - HP15_1259 0.74 +1.1 1,320,158 + HP15_1259 0.76 +0.9 1,320,158 + HP15_1259 0.76 +0.2 1,320,361 + +0.0 1,320,369 - -0.7 1,320,397 + -0.6 1,320,591 + HP15_1260 0.26 +0.1 1,320,599 - HP15_1260 0.27 +0.2 1,320,695 - HP15_1260 0.42 +0.9 1,320,695 - HP15_1260 0.42 +1.3 1,320,706 - HP15_1260 0.44 -1.2 1,320,715 + HP15_1260 0.45 +0.2 1,320,791 + HP15_1260 0.58 -0.2 1,320,791 + HP15_1260 0.58 +0.4 1,320,955 + HP15_1260 0.84 -0.4 1,320,963 - HP15_1260 0.85 -0.1 1,320,997 + -0.5 1,321,054 + +0.7 1,321,054 + -0.2 1,321,106 - +1.6 1,321,217 + HP15_1261 0.29 -1.5 1,321,474 + HP15_1261 0.75 +0.5 1,321,474 + HP15_1261 0.75 +3.7 1,321,595 + +0.2 1,322,160 - HP15_1262 0.79 +1.1 1,322,277 + +0.9 1,322,523 + HP15_1263 0.17 +0.9 1,322,543 + HP15_1263 0.19 +0.1
Or see this region's nucleotide sequence